RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 OR1F1O43749 312 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 LDB3O75112 727 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 AVPP01185 164 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 PPP3CBP16298 524 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 FERP16591 822 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 MDKP21741 143 aaPredicted RBP7.9□□□□□ -1.14
GARNL3-219ENST00000495172 OMGP23515 440 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 APEX1P27695 318 aaKnown RBP7.9□□□□□ -1.14
GARNL3-219ENST00000495172 IMPA1P29218 277 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 TTKP33981 857 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 GRK3P35626 688 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 MSH2P43246 934 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 LIMS1P48059 325 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 PDLIM4P50479 330 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 MMP16P51512 607 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 EFNA4P52798 201 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 GFRA1P56159 465 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 KRT31Q15323 416 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 PTRHD1Q6GMV3 140 aaKnown RBP7.9□□□□□ -1.14
GARNL3-219ENST00000495172 ZNF793Q6ZN11 406 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 MBOAT1Q6ZNC8 495 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 RHOUQ7L0Q8 258 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 ANKS4BQ8N8V4 417 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 MORN4Q8NDC4 146 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 PPHLN1Q8NEY8 458 aaKnown RBP7.9□□□□□ -1.14
GARNL3-219ENST00000495172 OR5L2Q8NGL0 311 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 OR13J1Q8NGT2 312 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 RBMXL1Q96E39 390 aaKnown RBP7.9□□□□□ -1.14
GARNL3-219ENST00000495172 ZNF778Q96MU6 729 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 FOPNLQ96NB1 174 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 SNX18Q96RF0 628 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 FERMT1Q9BQL6 677 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 ALOXE3Q9BYJ1 711 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 GRIP2Q9C0E4 1043 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 CDC42EP4Q9H3Q1 356 aaKnown RBP7.9□□□□□ -1.14
GARNL3-219ENST00000495172 GALNT9Q9HCQ5 603 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 CBLN4Q9NTU7 201 aa7.9□□□□□ -1.14
GARNL3-219ENST00000495172 PJA2O43164 708 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 NIPSNAP2O75323 286 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 PSIP1O75475 530 aaKnown RBP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 AQP8O94778 261 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TSPAN15O95858 294 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 CRHP06850 196 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 F7P08709 466 aaPredicted RBP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TNNT1P13805 278 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 ZNF708P17019 499 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 PAMP19021 973 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TPSB2P20231 275 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 CHMP24386 653 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 RBL1P28749 1068 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 CASP3P42574 277 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 SUCLG1P53597 346 aaKnown RBP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TBPL1P62380 186 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 EEF1A1P68104 462 aaKnown RBP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 BTN3A2P78410 334 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 GUSBP1Q15486 140 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TRIP10Q15642 601 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TPSAB1Q15661 275 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 NTRK2Q16620 822 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 PHKG1Q16816 387 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 KLHL38Q2WGJ6 581 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 BEAN1Q3B7T3 259 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 CTSL3PQ5NE16 218 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 EEF1A1P5Q5VTE0 462 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 TIGD3Q6B0B8 471 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 GALNT12Q8IXK2 581 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 MRAPQ8TCY5 172 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 STYXQ8WUJ0 223 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 PPWD1Q96BP3 646 aaKnown RBP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 SORCS2Q96PQ0 1159 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 PINK1Q9BXM7 581 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 MAK16Q9BXY0 300 aaKnown RBP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 MMP27Q9H306 513 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 DNAJC11Q9NVH1 559 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 RNF112Q9ULX5 631 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 USP22Q9UPT9 525 aa7.89□□□□□ -1.15
GARNL3-219ENST00000495172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
GARNL3-219ENST00000495172 NPIPA5A0A0B4J1W7 369 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 B4DXG7 233 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 NPIPA7E9PJI5 369 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 ABCD4O14678 606 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 ANXA9O76027 345 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 SLU7O95391 586 aaKnown RBP7.88□□□□□ -1.15
GARNL3-219ENST00000495172 ESR1P03372 595 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 KRT1P04264 644 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 NPIPA8P0DM63 369 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 SLC6A8P48029 635 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 CDH15P55291 814 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 ARHGAP19Q14CB8 494 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 TOR1AIP1Q5JTV8 583 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 OR2A2Q6IF42 318 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 PPP4R4Q6NUP7 873 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 FIGNL1Q6PIW4 674 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 MFSD7Q6UXD7 560 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 USP43Q70EL4 1123 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 OR4N5Q8IXE1 308 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 OR1J4Q8NGS1 313 aa7.88□□□□□ -1.15
GARNL3-219ENST00000495172 OR8K3Q8NH51 312 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms