RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 LRRC3CA6NJW4 275 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 SYCE1LA8MT33 242 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 FAM47E-STBD1D6RA91 191 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 ZWINTO95229 277 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 GPR75O95800 540 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 SERPINB3P29508 390 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 STX2P32856 288 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 DLX5P56178 289 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 RPS13P62277 151 aaKnown RBP20.32■□□□□ 0.84
HDDC3-203ENST00000494993 PHEXP78562 749 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 C2orf54Q08AI8 447 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 NAB1Q13506 487 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 ZNF267Q14586 743 aaPredicted RBP20.32■□□□□ 0.84
HDDC3-203ENST00000494993 SETDB1Q15047 1291 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 EBPQ15125 230 aaKnown RBP20.32■□□□□ 0.84
HDDC3-203ENST00000494993 RIPPLY2Q5TAB7 128 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 MRM1Q6IN84 353 aaKnown RBP20.32■□□□□ 0.84
HDDC3-203ENST00000494993 CCDC25Q86WR0 208 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 CENPLQ8N0S6 344 aaPredicted RBP20.32■□□□□ 0.84
HDDC3-203ENST00000494993 FAM13CQ8NE31 585 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 OR10G3Q8NGC4 313 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 RHEBL1Q8TAI7 183 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 KCTD4Q8WVF5 259 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 WWTR1Q9GZV5 400 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 LYARQ9NX58 379 aaKnown RBP20.32■□□□□ 0.84
HDDC3-203ENST00000494993 QPCTLQ9NXS2 382 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 ACOT9Q9Y305 439 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 L3MBTL1Q9Y468 752 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 ASB4Q9Y574 426 aa20.32■□□□□ 0.84
HDDC3-203ENST00000494993 A0A0A6YYD5 115 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 H0YIV9 168 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 OR10H2O60403 315 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 EEDO75530 441 aaKnown RBP20.31■□□□□ 0.84
HDDC3-203ENST00000494993 PTX3P26022 381 aaPredicted RBP20.31■□□□□ 0.84
HDDC3-203ENST00000494993 BSGP35613 385 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 MAGEA4P43358 317 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 ART1P52961 327 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 PLTPP55058 493 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 SLC37A1P57057 533 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 IRF9Q00978 393 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 CAV1Q03135 178 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 FBXO25Q8TCJ0 367 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 REPS1Q96D71 796 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 SLC6A15Q9H2J7 730 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 ACTR8Q9H981 624 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 ACKR4Q9NPB9 350 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 CNOT11Q9UKZ1 510 aaKnown RBP20.31■□□□□ 0.84
HDDC3-203ENST00000494993 PYCARDQ9ULZ3 195 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 PCDHGB3Q9Y5G1 929 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 MPDZO75970 2070 aa20.31■□□□□ 0.84
HDDC3-203ENST00000494993 A0A087X1B8 175 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 GLOD5A6NK44 160 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 OR6C76A6NM76 312 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 WASHC1A8K0Z3 465 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 TMPRSS11DO60235 418 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 NR2F6P10588 404 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 GFAPP14136 432 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 DNAJA1P31689 397 aaKnown RBP20.3■□□□□ 0.84
HDDC3-203ENST00000494993 NTRK2Q16620 822 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 PFKFB4Q16877 469 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 WDR53Q7Z5U6 358 aaPredicted RBP20.3■□□□□ 0.84
HDDC3-203ENST00000494993 CCDC91Q7Z6B0 441 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 ULK2Q8IYT8 1036 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 NEIL3Q8TAT5 605 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 NRGNQ92686 78 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 RIT1Q92963 219 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 JSRP1Q96MG2 331 aaPredicted RBP20.3■□□□□ 0.84
HDDC3-203ENST00000494993 DDX31Q9H8H2 851 aaKnown RBP20.3■□□□□ 0.84
HDDC3-203ENST00000494993 WDR41Q9HAD4 459 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 B4GALT7Q9UBV7 327 aa20.3■□□□□ 0.84
HDDC3-203ENST00000494993 UTP11Q9Y3A2 253 aaKnown RBP20.3■□□□□ 0.84
HDDC3-203ENST00000494993 DOCK7Q96N67 2140 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 A0A1W2PR48 441 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 CCDC189A1A4V9 331 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 LRRC14BA6NHZ5 514 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 UGDHO60701 494 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 LRATO95237 230 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 CLPSP04118 112 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 FAM58BPP0C7Q3 252 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 GALNSP34059 522 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 ALDH18A1P54886 795 aaKnown RBP20.29■□□□□ 0.84
HDDC3-203ENST00000494993 CUL3Q13618 768 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 CPSF6Q16630 551 aaKnown RBP eCLIP20.29■□□□□ 0.84
HDDC3-203ENST00000494993 FAM83EQ2M2I3 478 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 CYP20A1Q6UW02 462 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 ARSKQ6UWY0 536 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 LIX1Q8N485 282 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 DOHHQ9BU89 302 aa20.29■□□□□ 0.84
HDDC3-203ENST00000494993 PRRC2AP48634 2157 aaKnown RBP20.29■□□□□ 0.84
HDDC3-203ENST00000494993 KIAA1549Q9HCM3 1950 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 AIFM1O95831 613 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 C2P06681 752 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 TRPC1P48995 793 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 GTF2H2Q13888 395 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 ACAP2Q15057 778 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 PCBP2Q15366 365 aaKnown RBP eCLIP20.28■□□□□ 0.84
HDDC3-203ENST00000494993 GTF2H2CQ6P1K8 395 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 ZDHHC24Q6UX98 284 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 SEM1Q6ZVN7 128 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 GOLGA7Q7Z5G4 137 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms