RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 YARS2Q9Y2Z4 477 aaKnown RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 TRAF6Q9Y4K3 522 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 CPAMD8Q8IZJ3 1885 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 WWP2O00308 870 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 BIRC5O15392 142 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 OR2J2O76002 312 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 RASAL1O95294 804 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 FGF4P08620 206 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 LINC00032P0C843 101 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 CPMP14384 443 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 DRD2P14416 443 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 GALNSP34059 522 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 FEN1P39748 380 aaKnown RBP14.81□□□□□ -0.04
LIME1-209ENST00000494776 GSTM5P46439 218 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 HLCSP50747 726 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 SSR4P51571 173 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 RNF4P78317 190 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 CASP8Q14790 479 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 HEPACAMQ14CZ8 416 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 NR6A1Q15406 480 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 INAQ16352 499 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 SPRED3Q2MJR0 410 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 TNFAIP8L3Q5GJ75 292 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 GALNT18Q6P9A2 607 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 RNF111Q6ZNA4 994 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 GALNT12Q8IXK2 581 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 ANKRD42Q8N9B4 389 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 TMEM178AQ8NBL3 297 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 GALNT11Q8NCW6 608 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 OR8K3Q8NH51 312 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 GRHL3Q8TE85 626 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 ASB15Q8WXK1 588 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 MYOTQ9UBF9 498 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 UTS2RQ9UKP6 389 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 ERVK-11Q9UQG0 969 aa14.81□□□□□ -0.04
LIME1-209ENST00000494776 POLR3HQ9Y535 204 aaPredicted RBP14.81□□□□□ -0.04
LIME1-209ENST00000494776 A0A1W2PS29 197 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 HRKO00198 91 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 SLC25A12O75746 678 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 HSPA4LO95757 839 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 CSNK2A2P19784 350 aaPredicted RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 TRHRP34981 398 aaPredicted RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 HK2P52789 917 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 ZNF763Q0D2J5 394 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 C2orf80Q0P641 193 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 ELOAQ14241 798 aaKnown RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 CHI3L2Q15782 390 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 MAPKAPK3Q16644 382 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 ZNF750Q32MQ0 723 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 ZNF468Q5VIY5 522 aaPredicted RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 HHATQ5VTY9 493 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 C16orf47Q6ZP98 133 aaPredicted RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 SLC29A4Q7RTT9 530 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 ARMC10Q8N2F6 343 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 BCORP1Q8N888 145 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 FAM98AQ8NCA5 519 aaKnown RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 MDS2Q8NDY4 140 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 FAM76AQ8TAV0 307 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 TWIST2Q8WVJ9 160 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 BRINP2Q9C0B6 783 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 CXorf21Q9HAI6 301 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 LRTM1Q9HBL6 345 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 GIMAP4Q9NUV9 329 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 ARGLU1Q9NWB6 273 aaPredicted RBP14.8□□□□□ -0.04
LIME1-209ENST00000494776 C1orf109Q9NX04 203 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 SIRT5Q9NXA8 310 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 HEY2Q9UBP5 337 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 CES1P1Q9UKY3 287 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 NTNG1Q9Y2I2 539 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 DNAJC15Q9Y5T4 150 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 PTGDR2Q9Y5Y4 395 aa14.8□□□□□ -0.04
LIME1-209ENST00000494776 A8MVJ9 347 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 TMEM233B4DJY2 109 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 TCP11X1B4DZS4 312 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 CRYABP02511 175 aaKnown RBP14.79□□□□□ -0.04
LIME1-209ENST00000494776 IGKV3-11P04433 115 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 SERPINE1P05121 402 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 SP1P08047 785 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 MAGOHP61326 146 aaKnown RBP14.79□□□□□ -0.04
LIME1-209ENST00000494776 SLC25A25Q6KCM7 469 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 NOXRED1Q6NXP6 359 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 FAM180BQ6P0A1 224 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 CYP4Z2PQ8N1L4 340 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 FAR1Q8WVX9 515 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 EXOSC8Q96B26 276 aaKnown RBP14.79□□□□□ -0.04
LIME1-209ENST00000494776 C11orf24Q96F05 449 aaPredicted RBP14.79□□□□□ -0.04
LIME1-209ENST00000494776 METTL2AQ96IZ6 378 aaKnown RBP14.79□□□□□ -0.04
LIME1-209ENST00000494776 GAL3ST4Q96RP7 486 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 HES7Q9BYE0 225 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 TMBIM4Q9HC24 238 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 MIEF1Q9NQG6 463 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 OLAHQ9NV23 265 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 HPF1Q9NWY4 346 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 ENTPD4Q9Y227 616 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 PCDHGB6Q9Y5F9 930 aa14.79□□□□□ -0.04
LIME1-209ENST00000494776 TMEM200CA6NKL6 621 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 OR6C76A6NM76 312 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 TMEM114B3SHH9 223 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 PIP5K1BO14986 540 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 NEURL1O76050 574 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms