RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 DOCK7Q96N67 2140 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 LRRC3CA6NJW4 275 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 CAPN14A8MX76 684 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 UBXN8O00124 270 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 CES2O00748 559 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 TP53I11O14683 189 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 PROM1O43490 865 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 NR2F6P10588 404 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 SSTR1P30872 391 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 GGT5P36269 586 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 GMPRP36959 345 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 CPA2P48052 419 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 FBXW4P57775 412 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 RAB10P61026 200 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 CALCOCO2Q13137 446 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 FRG1Q14331 258 aaKnown RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 HYAL4Q2M3T9 481 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 ZNF791Q3KP31 576 aaPredicted RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 ACSF3Q4G176 576 aaPredicted RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 BICRALQ6AI39 1079 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 CCDC25Q86WR0 208 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 DND1Q8IYX4 353 aaKnown RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 PRR22Q8IZ63 422 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 SLC15A4Q8N697 577 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 TEX9Q8N6V9 391 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 RELL2Q8NC24 303 aaPredicted RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 PDPRQ8NCN5 879 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 NAXEQ8NCW5 288 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 BBOF1Q8ND07 529 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 C7orf57Q8NEG2 295 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 OR7G3Q8NG95 312 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 HUS1BQ8NHY5 278 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 STAG3L4Q8TBR4 150 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 PAQR8Q8TEZ7 354 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 FAM222BQ8WU58 562 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 TANKQ92844 425 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 FBXL20Q96IG2 436 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 RILPQ96NA2 401 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 CPNE1Q99829 537 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 PELOQ9BRX2 385 aaKnown RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 DPH5Q9H2P9 285 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 EPB41L4BQ9H329 900 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 ACTR8Q9H981 624 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 IGSF5Q9NSI5 407 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 MOCS1Q9NZB8 636 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 NUDT4Q9NZJ9 180 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 PTBP2Q9UKA9 531 aaKnown RBP8.85□□□□□ -0.99
UBR4-216ENST00000494503 CBLCQ9ULV8 474 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 SLC6A5Q9Y345 797 aa8.85□□□□□ -0.99
UBR4-216ENST00000494503 KIAA1549Q9HCM3 1950 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 HRNRQ86YZ3 2850 aaPredicted RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 C2orf92A0A1B0GVN3 265 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 CXorf49A8MYA2 514 aaPredicted RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 KDM4EB2RXH2 506 aaPredicted RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 K7EPI3 171 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 PLPP1O14494 284 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GNB5O14775 395 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 ACSL3O95573 720 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 RAF1P04049 648 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GBAP04062 536 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 FBXO45P0C2W1 286 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GFAPP14136 432 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 ADSLP30566 484 aaPredicted RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 SERPINB1P30740 379 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 SSTR4P31391 388 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GCKP35557 465 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GP5P40197 560 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 PAFAH1B1P43034 410 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 TMED10P49755 219 aaKnown RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 HNRNPH2P55795 449 aaKnown RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 NRG3P56975 720 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 RPS13P62277 151 aaKnown RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 EBPQ15125 230 aaKnown RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 RPS6KA2Q15349 733 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 SF3B4Q15427 424 aaKnown RBP eCLIP8.84□□□□□ -0.993e-44■■■■■ 91.2
UBR4-216ENST00000494503 TBCCQ15814 346 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 NNATQ16517 81 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 KBTBD12Q3ZCT8 623 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 CDKL4Q5MAI5 379 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GRHL2Q6ISB3 625 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 PAMR1Q6UXH9 720 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 TAOK1Q7L7X3 1001 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 MAATS1Q7Z4T9 603 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 CMC1Q7Z7K0 106 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 KIF18BQ86Y91 864 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 LACC1Q8IV20 430 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 PM20D2Q8IYS1 436 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 ST13P4Q8IZP2 240 aaPredicted RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 LRRC25Q8N386 305 aaPredicted RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 PPM1NQ8N819 430 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 LINC01560Q8TB33 94 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 MRRFQ96E11 262 aaKnown RBP8.84□□□□□ -0.99
UBR4-216ENST00000494503 WDR34Q96EX3 536 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 ALPK1Q96QP1 1244 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 GPR22Q99680 433 aa8.84□□□□□ -0.99
UBR4-216ENST00000494503 RBBP8Q99708 897 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms