RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CXCL12P48061 93 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 OLR1P78380 273 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SIM2Q14190 667 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 MANEAQ5SRI9 462 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 KDM4DQ6B0I6 523 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SZRD1Q7Z422 152 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ARMC8Q8IUR7 673 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SLC44A2Q8IWA5 706 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 METTL25Q8N6Q8 603 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 TSPAN14Q8NG11 270 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 OR9A2Q8NGT5 310 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 MAGED4Q96JG8 741 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ZNF300Q96RE9 604 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 UCK1Q9HA47 277 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SLC22A7Q9Y694 548 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 MITFO75030 526 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 MFN2O95140 757 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 RRM2P31350 389 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 EPS8Q12929 822 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SYPL1Q16563 259 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 KCTD21Q4G0X4 260 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ARMC6Q6NXE6 501 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 TTC33Q6PID6 262 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SLC36A4Q6YBV0 504 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ZNF786Q8N393 782 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ARHGEF39Q8N4T4 335 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 CSNK1A1LQ8N752 337 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 GEMIN6Q8WXD5 167 aaKnown RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 DNASE2BQ8WZ79 361 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ELP4Q96EB1 424 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 SPACA7Q96KW9 195 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 GIMAP4Q9NUV9 329 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 PDP1Q9P0J1 537 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-225ENST00000494465 C3orf18Q9UK00 162 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 PSME2Q9UL46 239 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ZNF780BQ9Y6R6 833 aa15.57■□□□□ 0.08
ATG4B-225ENST00000494465 ZNF860A6NHJ4 632 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 AQP9O43315 295 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 HMGN2P05204 90 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 POLR2IP36954 125 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 MC3RP41968 323 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 RPL5P46777 297 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 RXRGP48443 463 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 CSNK1EP49674 416 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 VSX2P58304 361 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 PUM1Q14671 1186 aaKnown RBP eCLIP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 LTB4RQ15722 352 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 ZC3H12BQ5HYM0 836 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 SATL1Q86VE3 508 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 UBALD2Q8IYN6 164 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 GPR32P1Q8NGA4 272 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 MIPOL1Q8TD10 442 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 FAM192AQ9GZU8 254 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 RUBCNLQ9H714 662 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 ANKRA2Q9H9E1 313 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 LYRM4Q9HD34 91 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 STARD5Q9NSY2 213 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 SIT1Q9Y3P8 196 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 PCDHGB3Q9Y5G1 929 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 LYVE1Q9Y5Y7 322 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 CACNA1IQ9P0X4 2223 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 C5orf58C9J3I9 102 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 LMO7DNF2Z398 122 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 FHP07954 510 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 PABPC4LP0CB38 370 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 IGFBP5P24593 272 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 MAGEA8P43361 318 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 CAPZBP47756 277 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 ARHGDIAP52565 204 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 PRKAG1P54619 331 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 SIM1P81133 766 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 FUT5Q11128 374 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 LASP1Q14847 261 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 TTC23Q5W5X9 447 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 FAHD1Q6P587 224 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 C19orf47Q8N9M1 422 aaKnown RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 AVL9Q8NBF6 648 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 XAGE5Q8WWM1 108 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 MOAP1Q96BY2 351 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 OTUB1Q96FW1 271 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 C16orf58Q96GQ5 468 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 TREX2Q9BQ50 279 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-225ENST00000494465 CXorf56Q9H5V9 222 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 PRDM9Q9NQV7 894 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 UCKL1Q9NWZ5 548 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 P2RX2Q9UBL9 471 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 DOLKQ9UPQ8 538 aa15.56■□□□□ 0.08
ATG4B-225ENST00000494465 LILRA5A6NI73 299 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 SLC16A6O15403 523 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 GALR3O60755 368 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-225ENST00000494465 ZNF10P21506 573 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-225ENST00000494465 SOX18P35713 384 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 XCR1P46094 333 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 KHKP50053 298 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 CDH15P55291 814 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 HNRNPKP61978 463 aaKnown RBP eCLIP15.55■□□□□ 0.087e-7■■■■□ 23
ATG4B-225ENST00000494465 DEFB133Q30KQ1 61 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 DEFB110Q30KQ9 67 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 RFX4Q33E94 735 aa15.55■□□□□ 0.08
ATG4B-225ENST00000494465 OGFOD3Q6PK18 319 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms