RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 LMF1Q96S06 567 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 C1orf50Q9BV19 199 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 CNPPD1Q9BV87 410 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 NOP53Q9NZM5 478 aaKnown RBP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 ABI3Q9P2A4 366 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 RALYQ9UKM9 306 aaKnown RBP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 ITPR1Q14643 2758 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 K7EM74 188 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 PDGFAP04085 211 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 DDX5P17844 614 aaKnown RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 NT5EP21589 574 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 TACR1P25103 407 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 EMX2Q04743 252 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 SPRED3Q2MJR0 410 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF750Q32MQ0 723 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 SOWAHCQ53LP3 525 aaPredicted RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 IL23RQ5VWK5 629 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 B3GNTL1Q67FW5 361 aaPredicted RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 H3F3CQ6NXT2 135 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 LINC00696Q6ZRV3 163 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 TICAM1Q8IUC6 712 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 GALNT12Q8IXK2 581 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 LIX1Q8N485 282 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 AMER2Q8N7J2 671 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 APCDD1LQ8NCL9 501 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 OR1N1Q8NGS0 311 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 CLHC1Q8NHS4 586 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 PIWIL2Q8TC59 973 aaKnown RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 GFM2Q969S9 779 aaKnown RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 SENP5Q96HI0 755 aaPredicted RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 FBXL20Q96IG2 436 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 BBS4Q96RK4 519 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 SEMA4CQ9C0C4 833 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 SLC35C2Q9NQQ7 365 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 BAIAP2L1Q9UHR4 511 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 A0A1W2PS29 197 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 DYTNA2CJ06 578 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 AKAP10O43572 662 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ZFAND5O76080 213 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 LRATO95237 230 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ATP1B1P05026 303 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 LBPP18428 481 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 NTSP30990 170 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 HPCAL1P37235 193 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 RPL3P39023 403 aaKnown RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 GPR143P51810 404 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ERVK-8P63133 956 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 NFATC3Q12968 1075 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 MEP1AQ16819 746 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 FCRLBQ6BAA4 426 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 IGFL3Q6UXB1 125 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 HSDL2Q6YN16 418 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 DGAT2L6Q6ZPD8 337 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 R3HCC1LQ7Z5L2 792 aaKnown RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 WDR75Q8IWA0 830 aaKnown RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 TEX19Q8NA77 164 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF721Q8TF20 911 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 PPCDCQ96CD2 204 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 CNRIP1Q96F85 164 aaPredicted RBP11.62□□□□□ -0.55
TRA2A-209ENST00000494255 REEP4Q9H6H4 257 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 CXorf21Q9HAI6 301 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 TAS2R7Q9NYW3 318 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 STMN3Q9NZ72 180 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 ERVK-19Q9WJR5 959 aa11.62□□□□□ -0.55
TRA2A-209ENST00000494255 LAMA5O15230 3695 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 SDHDO14521 159 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 FCHO1O14526 889 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 MPIP34949 423 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 NXNQ6DKJ4 435 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 FAM180BQ6P0A1 224 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 IGFL2Q6UWQ7 119 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 RNF111Q6ZNA4 994 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 RPS19BP1Q86WX3 136 aaKnown RBP11.61□□□□□ -0.55
TRA2A-209ENST00000494255 PTRH1Q86Y79 214 aaKnown RBP11.61□□□□□ -0.55
TRA2A-209ENST00000494255 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 FAM9CQ8IZT9 166 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 LGI4Q8N135 537 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 VWA5B2Q8N398 1253 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 OR8K3Q8NH51 312 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 DOK4Q8TEW6 326 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 THAP3Q8WTV1 239 aaPredicted RBP11.61□□□□□ -0.55
TRA2A-209ENST00000494255 MTERF3Q96E29 417 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF681Q96N22 645 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 BRINP2Q9C0B6 783 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 CDCP1Q9H5V8 836 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 SLCO1B3Q9NPD5 702 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 ASIC5Q9NY37 505 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 SH3BP4Q9P0V3 963 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 MAPRE3Q9UPY8 281 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 USH1CQ9Y6N9 552 aa11.61□□□□□ -0.55
TRA2A-209ENST00000494255 LOC400499M0QZD8 3231 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 PDPK1O15530 556 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 TBX19O60806 448 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 CASRP41180 1078 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms