RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 FAM58BPP0C7Q3 252 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 CCL3P10147 92 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 NR2F6P10588 404 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 CAPN3P20807 821 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 MAN2A2P49641 1150 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 SERPINB9P50453 376 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 CCNG1P51959 295 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 TRAF3Q13114 568 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 TSNAXIP1Q2TAA8 658 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 GXYLT1Q4G148 440 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 EMC4Q5J8M3 183 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 C10orf62Q5T681 223 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 HLA-DQA1Q5Y7H0 255 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 RNF111Q6ZNA4 994 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 OR10Q1Q8NGQ4 319 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 RIT1Q92963 219 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 SARAFQ96BY9 339 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 C14orf79Q96F83 325 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 FBXL20Q96IG2 436 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 LURAP1Q96LR2 239 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 DDX31Q9H8H2 851 aaKnown RBP12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 KCNJ16Q9NPI9 418 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 SEMA4BQ9NPR2 832 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 CNIH4Q9P003 139 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 XPR1Q9UBH6 696 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 PCTPQ9UKL6 214 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 ACAD8Q9UKU7 415 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 BOKQ9UMX3 212 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ATP6AP2A0A1C7CYW4 349 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 OR6C76A6NM76 312 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 SUSD5O60279 629 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 GUCY1B2O75343 617 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ATP6AP2O75787 350 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 KRT38O76015 456 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 GLSO94925 669 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 AIFM1O95831 613 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 CELA3AP09093 270 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 PIK3R1P27986 724 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 GALNSP34059 522 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 MAGEA5P43359 124 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 KIR3DL1P43629 444 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 DNASE1L1P49184 302 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 HERVK_113P63132 956 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ERVK-8P63133 956 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 KCNJ2P63252 427 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 PMPCAQ10713 525 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 FOXO1Q12778 655 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 IFT88Q13099 833 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 SPRED3Q2MJR0 410 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 WLSQ5T9L3 541 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF585AQ6P3V2 769 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 TAGAPQ8N103 731 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 FAM13CQ8NE31 585 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 LILRB4Q8NHJ6 448 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 IFT81Q8WYA0 676 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF592Q92610 1267 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 SPACA9Q96E40 222 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 TRIM8Q9BZR9 551 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ENKD1Q9H0I2 346 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 NOL11Q9H8H0 719 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 SH2D2AQ9NP31 389 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 TEX10Q9NXF1 929 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 B4GALT7Q9UBV7 327 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF225Q9UK10 706 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 ERVK-19Q9WJR5 959 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 RNF6Q9Y252 685 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 PCNX1Q96RV3 2341 aa12.36□□□□□ -0.43
CTDSP1-212ENST00000494067 CACNA1CQ13936 2221 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 STX16-NPEPL1H3BU86 382 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 AQP7O14520 342 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 STX16O14662 325 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 PGRMC2O15173 223 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 HCN1O60741 890 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 SEMA3DO95025 777 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 IGHG3P01860 377 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 SLC35E2P0CK97 266 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 COL6A2P12110 1019 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 TSPAN8P19075 237 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 CNTFP26441 200 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 ACVR2AP27037 513 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 RPP38P78345 283 aaKnown RBP12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 ZNF791Q3KP31 576 aaPredicted RBP12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 TBCELQ5QJ74 424 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
CTDSP1-212ENST00000494067 OR52E8Q6IFG1 317 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms