RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MANFP55145 182 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 REEP5Q00765 189 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 SPHARQ15513 63 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 SPDYE7PQ495Y7 208 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 TMEM52BQ4KMG9 183 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ZNF385BQ569K4 471 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 C3orf38Q5JPI3 329 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 STEAP3Q658P3 488 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 RAET1GQ6H3X3 334 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 KLHL17Q6TDP4 642 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 METAP1DQ6UB28 335 aaPredicted RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ADAMTSL4Q6UY14 1074 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 HSDL2Q6YN16 418 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ERN2Q76MJ5 926 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 GET4Q7L5D6 327 aaPredicted RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 FAM129CQ86XR2 697 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 CFAP206Q8IYR0 622 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 SAMD14Q8IZD0 417 aaPredicted RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 FAM26EQ8N5C1 309 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 RPL3LQ92901 407 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 RFKQ969G6 155 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 RGMAQ96B86 450 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 NIPSNAP1Q9BPW8 284 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 MS4A8Q9BY19 250 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 POLR2J2Q9GZM3 115 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 POLR2J3Q9H1A7 115 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 CACYBPQ9HB71 228 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 SMURF1Q9HCE7 757 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 PRDM8Q9NQV8 689 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 MED17Q9NVC6 651 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 MRPS18AQ9NVS2 196 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 GPATCH2Q9NW75 528 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 SEC14L3Q9UDX4 400 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ADAM30Q9UKF2 790 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ACSL5Q9ULC5 683 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 DIMT1Q9UNQ2 313 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 GSTK1Q9Y2Q3 226 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 EXOSC1Q9Y3B2 195 aaKnown RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 MAP4K5Q9Y4K4 846 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 TMEM129A0AVI4 362 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 FAM172BPA6NC97 362 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 RGS13O14921 159 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 YY2O15391 372 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 KIAA0513O60268 411 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 OR10H3O60404 316 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 LILRB5O75023 590 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 MTX2O75431 263 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 CLEC3AO75596 197 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 MFN2O95140 757 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 B3GALT4O96024 378 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 PTHP01270 115 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 VIPP01282 170 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 KLK1P06870 262 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 ALOX12P18054 663 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 ELAVL4P26378 380 aaKnown RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 ACADLP28330 430 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 SLC19A1P41440 591 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 KCNJ5P48544 419 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 GSSP48637 474 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 SMSP52788 366 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 SCN1BQ07699 218 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 TGM3Q08188 693 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 RAB40BQ12829 278 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 LY6G5CQ5SRR4 150 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 AGAP6Q5VW22 663 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 FAM46CQ5VWP2 391 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 TMPRSS11AQ6ZMR5 421 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 PARS2Q7L3T8 475 aaKnown RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 BTLAQ7Z6A9 289 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 TSEN54Q7Z6J9 526 aaKnown RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 CELF5Q8N6W0 485 aaKnown RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 C12orf76Q8N812 135 aaPredicted RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 OR4K1Q8NGD4 311 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 OR56A1Q8NGH5 318 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 OR5K2Q8NHB8 316 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 SUN3Q8TAQ9 357 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 APOBEC4Q8WW27 367 aaKnown RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 AGAP4Q96P64 663 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 SLC38A2Q96QD8 506 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 SNX18Q96RF0 628 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 CHCHD6Q9BRQ6 235 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 TRAF4Q9BUZ4 470 aaPredicted RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 EXO1Q9UQ84 846 aaKnown RBP10.9□□□□□ -0.66
RFC4-214ENST00000494047 ASF1AQ9Y294 204 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 C2orf16Q68DN1 1984 aa10.9□□□□□ -0.66
RFC4-214ENST00000494047 A0A0G2JPF8 293 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 HNRNPCL2B2RXH8 293 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 HNRNPCL3B7ZW38 293 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 KPNA3O00505 521 aaPredicted RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 DSCR3O14972 297 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 LZTS3O60299 673 aaPredicted RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 NFATC1O95644 943 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 OPN1SWP03999 348 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 HNRNPCL4P0DMR1 293 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 ADH5P11766 374 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 TPTEP56180 551 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms