RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	CLPS	P04118	112 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	FGF4	P08620	206 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ANXA4	P09525	319 aa	Predicted RBP	10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	TACR1	P25103	407 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	SOX18	P35713	384 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	SERPINB5	P36952	375 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	FEN1	P39748	380 aa	Known RBP	10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	CLCN2	P51788	898 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ABCE1	P61221	599 aa	Known RBP	10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ERVK-8	P63133	956 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ARG2	P78540	354 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	PLIN5	Q00G26	463 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	TLE1	Q04724	770 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	SRSF11	Q05519	484 aa	Known RBP	10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	BST1	Q10588	318 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	NR6A1	Q15406	480 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	LTB4R	Q15722	352 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	LCE2C	Q5TA81	110 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	AGBL2	Q5U5Z8	902 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ABHD17B	Q5VST6	288 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	HHAT	Q5VTY9	493 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	GALNT18	Q6P9A2	607 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ZNF605	Q86T29	641 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	CLYBL	Q8N0X4	340 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	TMEM132C	Q8N3T6	1108 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ZNF781	Q8N8C0	355 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	OR14A16	Q8NHC5	309 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	PNPLA2	Q96AD5	504 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	VMP1	Q96GC9	406 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	EGLN2	Q96KS0	407 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	SH3GL2	Q99962	352 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	CNPPD1	Q9BV87	410 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	HES7	Q9BYE0	225 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	DEFB126	Q9BYW3	111 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	STMN4	Q9H169	189 aa	Predicted RBP	10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	WDR41	Q9HAD4	459 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	EML4	Q9HC35	981 aa	Known RBP	10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	SIRT5	Q9NXA8	310 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	STMN3	Q9NZ72	180 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	ERVK-19	Q9WJR5	959 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	B3GNT3	Q9Y2A9	372 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	NTNG1	Q9Y2I2	539 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	CLCA3P	Q9Y6N3	262 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	GTF3C1	Q12789	2109 aa		10.84	□□□□□ -0.67
UBA3-211	ENST00000493957	HIVEP3	Q5T1R4	2406 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ATP6AP2	A0A1C7CYW4	349 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	C1orf226	A1L170	272 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	GABRR3	A8MPY1	467 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TMEM114	B3SHH9	223 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SLC28A1	O00337	649 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	LSM1	O15116	133 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	OR10H2	O60403	315 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	KLHL41	O60662	606 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF354A	O60765	605 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SEC22B	O75396	215 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ERAL1	O75616	437 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ATP6AP2	O75787	350 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	IGKV3-11	P04433	115 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	CPM	P14384	443 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	PRPH2	P23942	346 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	PIK3R1	P27986	724 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SSTR4	P31391	388 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	CD96	P40200	585 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SLC1A6	P48664	564 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TNFSF10	P50591	281 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	XK	P51811	444 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	MLF1	P58340	268 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TRA2B	P62995	288 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	AP2B1	P63010	937 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	RPL38	P63173	70 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF763	Q0D2J5	394 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TUBA3C	Q13748	450 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF267	Q14586	743 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	IGFBP7	Q16270	282 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	MEP1A	Q16819	746 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	GALNTL6	Q49A17	601 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	RFTN2	Q52LD8	501 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	XKR7	Q5GH72	579 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	NOXRED1	Q6NXP6	359 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TUBA3E	Q6PEY2	450 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	RNF165	Q6ZSG1	346 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	HDX	Q7Z353	690 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	RPS19BP1	Q86WX3	136 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	HPS6	Q86YV9	775 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	C9orf40	Q8IXQ3	194 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ST13P4	Q8IZP2	240 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SLC5A8	Q8N695	610 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	MORN4	Q8NDC4	146 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SIMC1	Q8NDZ2	872 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	OR4K14	Q8NGD5	310 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	OR1N1	Q8NGS0	311 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	CLHC1	Q8NHS4	586 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TM9SF4	Q92544	642 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	DAZL	Q92904	295 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	KLHL29	Q96CT2	875 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	C19orf60	Q96EN9	201 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	CNRIP1	Q96F85	164 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SENP5	Q96HI0	755 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	FCRL1	Q96LA6	429 aa		10.83	□□□□□ -0.68

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