RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 FCRL5Q96RD9 977 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 SLC17A9Q9BYT1 436 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 NIPAL2Q9H841 368 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 FBXO8Q9NRD0 319 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 A0A0J9YYE9 177 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 A0A0U1RQS6 177 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 C9orf170A2RU37 121 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TUBAL3A6NHL2 446 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 H0Y8X5 98 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PHYHO14832 338 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KHNYNO15037 678 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 AVILO75366 819 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TRBC1P01850 177 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 GSTP1P09211 210 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PIRTP0C851 137 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TAC1P20366 129 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 HNF1AP20823 631 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 HNRNPA2B1P22626 353 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 GABRB3P28472 473 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 AKT2P31751 481 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 RYKP34925 604 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KCNJ1P48048 391 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 GRIA4P48058 902 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 AFF3P51826 1226 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 WNT3AP56704 352 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 VAMP2P63027 116 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ARHGEF7Q14155 803 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ACOX1Q15067 660 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KCTD19Q17RG1 926 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PEAR1Q5VY43 1037 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 LPCAT4Q643R3 524 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 NAPEPLDQ6IQ20 393 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TSPAN33Q86UF1 283 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 POU5F2Q8N7G0 328 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 WDSUB1Q8N9V3 476 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 BBS1Q8NFJ9 593 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 OR2L3Q8NG85 312 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PIH1D2Q8WWB5 315 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 MAFIPQ8WZ33 124 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ORAI3Q9BRQ5 295 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 GAL3ST2Q9H3Q3 398 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KAT8Q9H7Z6 458 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 WHRNQ9P202 907 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 SPASTQ9UBP0 616 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 AURKCQ9UQB9 309 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 LRRK1Q38SD2 2015 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 MROH6A6NGR9 719 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KRBOX1C9JBD0 128 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 E5RI56 91 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PRAMEF26H0Y7S4 382 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 WNT9AO14904 365 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 RAD51CO43502 376 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ANXA9O76027 345 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ITGAVP06756 1048 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 IGFBP1P08833 259 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 NR2C1P13056 603 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 CD247P20963 164 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 LHCGRP22888 699 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PI4KAP42356 2102 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 CSNK1EP49674 416 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 GEMP55040 296 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 CLDN2P57739 230 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 STAT4Q14765 748 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TOMM34Q15785 309 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TMEM52BQ4KMG9 183 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PLA2G2CQ5R387 149 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF385CQ66K41 422 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KRT80Q6KB66 452 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF782Q6ZMW2 699 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 REC114Q7Z4M0 266 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PTAR1Q7Z6K3 402 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 SLCO6A1Q86UG4 719 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ATCAYQ86WG3 371 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PRELID2Q8N945 189 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 CPEB3Q8NE35 698 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ABHD11Q8NFV4 315 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 LIPHQ8WWY8 451 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 SCRN2Q96FV2 425 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 MCCC1Q96RQ3 725 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 TRIB3Q96RU7 358 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 SMAD5Q99717 465 aaKnown RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 APOL2Q9BQE5 337 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 FICDQ9BVA6 458 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KLHL31Q9H511 634 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ANKHQ9HCJ1 492 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 NKIRAS1Q9NYS0 192 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 NDUFAF4Q9P032 175 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 COPZ2Q9P299 210 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 MLXQ9UH92 298 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 KLHL20Q9Y2M5 609 aa11.03□□□□□ -0.64
BRCA1-222ENST00000493919 ADAMTS9Q9P2N4 1935 aa11.02□□□□□ -0.64
BRCA1-222ENST00000493919 TP53BP1Q12888 1972 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms