RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SLC6A13Q9NSD5 602 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 CCDC88CQ9P219 2028 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 DYTNA2CJ06 578 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 ANP32DO95626 131 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 CALB2P22676 271 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 DLSTP36957 453 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 HBA1P69905 142 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 RTP5Q14D33 572 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 TMEM107Q6UX40 140 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 OR5AK3PQ8NH89 298 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 ZFP28Q8NHY6 868 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 TSPEARQ8WU66 669 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 KAT2AQ92830 837 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 MAGED4Q96JG8 741 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 CCDC115Q96NT0 180 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 DGAT2Q96PD7 388 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
USP39-218ENST00000493829 TRIM8Q9BZR9 551 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 WDR54Q9H977 334 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 ANKRA2Q9H9E1 313 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 MAP10Q9P2G4 905 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 NXT1Q9UKK6 140 aaKnown RBP18.15■□□□□ 0.5
USP39-218ENST00000493829 ACSL6Q9UKU0 697 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 SPTBN2O15020 2390 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 IGKV3D-11A0A0A0MRZ8 115 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 LOC101059948A0A1B0GTJ6 334 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 RRP9O43818 475 aaKnown RBP18.15■□□□□ 0.5
USP39-218ENST00000493829 MPIP34949 423 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 FOLR3P41439 243 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 FRKP42685 505 aaPredicted RBP18.15■□□□□ 0.5
USP39-218ENST00000493829 EMP2P54851 167 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 MRPS35P82673 323 aaKnown RBP18.15■□□□□ 0.5
USP39-218ENST00000493829 GAB1Q13480 694 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 DNASE1L3Q13609 305 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 MAP7Q14244 749 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 IGF2-ASQ6U949 168 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 MSANTD1Q6ZTZ1 278 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 IL22RA1Q8N6P7 574 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 BTNL2Q9UIR0 455 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 PCDHGB4Q9UN71 923 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 WASF3Q9UPY6 502 aa18.15■□□□□ 0.5
USP39-218ENST00000493829 SPTBN4Q9H254 2564 aa18.14■□□□□ 0.5
USP39-218ENST00000493829 SEC16AO15027 2179 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 AKAP13Q12802 2813 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 IGHV3-20A0A0C4DH32 117 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 KLF7O75840 302 aaPredicted RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 DXOO77932 396 aaKnown RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 KCNH1O95259 989 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 UMODP07911 640 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 CD82P27701 267 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 MC3RP41968 323 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 IGLV3-21P80748 117 aaPredicted RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 BNIP1Q12981 228 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 ART3Q13508 389 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 CEBPEQ15744 281 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 ZSCAN26Q16670 478 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 SPDYE7PQ495Y7 208 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 RINLQ6ZS11 566 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 SAMD14Q8IZD0 417 aaPredicted RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 OR5P2Q8WZ92 322 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 NKD1Q969G9 470 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 AURKBQ96GD4 344 aaPredicted RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 CXorf36Q9H7Y0 433 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 ACSS1Q9NUB1 689 aaPredicted RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 ERVK-11Q9UQG0 969 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 PADI2Q9Y2J8 665 aa18.14■□□□□ 0.49
USP39-218ENST00000493829 MRPS18BQ9Y676 258 aaKnown RBP18.14■□□□□ 0.49
USP39-218ENST00000493829 B2RBV5 119 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 ALOX12BO75342 701 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 C1QCP02747 245 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 SLC35E2P0CK97 266 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 TNNI3P19429 210 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 F8A1P23610 371 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 STT3AP46977 705 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 PGDP52209 483 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 RPS15P62841 145 aaKnown RBP18.13■□□□□ 0.49
USP39-218ENST00000493829 SERTAD2Q14140 314 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 ZNF621Q6ZSS3 439 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 NATD1Q8N6N6 113 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 PCYOX1LQ8NBM8 494 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 OR2Y1Q8NGV0 311 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 METTL21AQ8WXB1 218 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 C8orf44Q96CB5 159 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 PAIP1Q9H074 479 aaKnown RBP18.13■□□□□ 0.49
USP39-218ENST00000493829 EFCAB1Q9HAE3 211 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 TAS2R9Q9NYW1 312 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.13■□□□□ 0.49
USP39-218ENST00000493829 MAN2B2Q9Y2E5 1009 aa18.13■□□□□ 0.49
USP39-218ENST00000493829 TCRBV16S1A1N1A0A5B0 115 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 ATP1B1P05026 303 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 CT62P0C5K7 136 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 SLC25A3Q00325 362 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 EEF1A2Q05639 463 aaKnown RBP18.12■□□□□ 0.49
USP39-218ENST00000493829 TRMT5Q32P41 509 aaKnown RBP18.12■□□□□ 0.49
USP39-218ENST00000493829 COQ5Q5HYK3 327 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 FAM111BQ6SJ93 734 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 MED25Q71SY5 747 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 ANKRD37Q7Z713 158 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 VASH2Q86V25 355 aa18.12■□□□□ 0.49
USP39-218ENST00000493829 ST13P4Q8IZP2 240 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms