RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MAN1A2O60476 641 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 WDPCPO95876 746 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 PORP16435 677 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 GALNSP34059 522 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ERVK-8P63133 956 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 C2orf80Q0P641 193 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 BST1Q10588 318 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF169Q14929 603 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 KIAA0040Q15053 153 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 TLR1Q15399 786 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 SPRED3Q2MJR0 410 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 HSDL2Q6YN16 418 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 Q6ZS92 163 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 KIRREL3Q8IZU9 778 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF321PQ8N8H1 164 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF721Q8TF20 911 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 HAS2Q92819 552 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 EXOSC8Q96B26 276 aaKnown RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 C19orf60Q96EN9 201 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 SENP5Q96HI0 755 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 FBXL20Q96IG2 436 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 PPP3R2Q96LZ3 170 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 SORT1Q99523 831 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 CCT7Q99832 543 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 C20orf27Q9GZN8 174 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 EPN3Q9H201 632 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ACBD3Q9H3P7 528 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 MYNNQ9NPC7 610 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 CES1P1Q9UKY3 287 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ERVK-19Q9WJR5 959 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 TMED5Q9Y3A6 229 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF780BQ9Y6R6 833 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 GCN1Q92616 2671 aaKnown RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 HELZ2Q9BYK8 2649 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 OR5H15A6NDH6 313 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 GABRR3A8MPY1 467 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 HRKO00198 91 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ATP6AP2O75787 350 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 SORBS2O94875 1100 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 CPMP14384 443 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 CSNK2A2P19784 350 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 NT5EP21589 574 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ST13P50502 369 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 TNFSF10P50591 281 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 RPL14P50914 215 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 MLF1P58340 268 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF267Q14586 743 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF750Q32MQ0 723 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ATP6AP1LQ52LC2 224 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 RFTN2Q52LD8 501 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 XKR7Q5GH72 579 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ATG16L1Q676U5 607 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 IKBIPQ70UQ0 350 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 GALNT12Q8IXK2 581 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 Q8NA96 180 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 CATSPER1Q8NEC5 780 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 SUN3Q8TAQ9 357 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 RAB3IL1Q8TBN0 382 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 C3orf30Q96M34 536 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 UTP23Q9BRU9 249 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 CXorf21Q9HAI6 301 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 MIEF1Q9NQG6 463 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 GIMAP4Q9NUV9 329 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 EHD3Q9NZN3 535 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 ENTPD4Q9Y227 616 aa11.89□□□□□ -0.51
CLIP2-209ENST00000493166 WBP11Q9Y2W2 641 aaKnown RBP11.89□□□□□ -0.51
CLIP2-209ENST00000493166 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 TRAV17A0A0B4J275 112 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
CLIP2-209ENST00000493166 PEX11AO75192 247 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 SASH3O75995 380 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 IGKV3-11P04433 115 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 SDC1P18827 310 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 DDCP20711 480 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 TACR1P25103 407 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 MAPK1P28482 360 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 MLLT10P55197 1068 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 RNF4P78317 190 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 OC90Q02509 493 aaPredicted RBP11.88□□□□□ -0.51
CLIP2-209ENST00000493166 TLE1Q04724 770 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 TUBA3CQ13748 450 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 FAM71E1Q6IPT2 247 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 FAM180BQ6P0A1 224 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 TUBA3EQ6PEY2 450 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 RNF111Q6ZNA4 994 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 SAMD14Q8IZD0 417 aaPredicted RBP11.88□□□□□ -0.51
CLIP2-209ENST00000493166 ARMC10Q8N2F6 343 aa11.88□□□□□ -0.51
CLIP2-209ENST00000493166 LRRC25Q8N386 305 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms