RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FBXW4P57775 412 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 EBPQ15125 230 aaKnown RBP12.54□□□□□ -0.4
SAMM50-204ENST00000493161 NTRK2Q16620 822 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 VASNQ6EMK4 673 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 OR4C11Q6IEV9 310 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CLEC9AQ6UXN8 241 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 VWA5B2Q8N398 1253 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 TCAIMQ8N3R3 496 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 FBXO36Q8NEA4 188 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 SRFBP1Q8NEF9 429 aaKnown RBP12.54□□□□□ -0.4
SAMM50-204ENST00000493161 DIO2Q92813 273 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 EXT2Q93063 718 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 ARSGQ96EG1 525 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 GNRHR2Q96P88 292 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 TRIB1Q96RU8 372 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 KRT12Q99456 494 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 PRDM14Q9GZV8 571 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 RHOJQ9H4E5 214 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CNOT10Q9H9A5 744 aaKnown RBP12.54□□□□□ -0.4
SAMM50-204ENST00000493161 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CD274Q9NZQ7 290 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 JKAMPQ9P055 326 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CAMK2AQ9UQM7 478 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 SPACA6W5XKT8 324 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 MPDZO75970 2070 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 GLOD5A6NK44 160 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 CLCA1A8K7I4 914 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 HRGP04196 525 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 BMP7P18075 431 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 ADSLP30566 484 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 CDK9P50750 372 aaKnown RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 DCAF7P61962 342 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 PLIN5Q00G26 463 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 LAPTM5Q13571 262 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 E2F2Q14209 437 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 MORF4L2Q15014 288 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 TBCCQ15814 346 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 HIST2H2ACQ16777 129 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 TMEM35AQ53FP2 167 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 EIPR1Q53HC9 387 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 PAGE2BQ5JRK9 111 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 HIST2H2AA3Q6FI13 130 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 PLXDC2Q6UX71 529 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 RNF111Q6ZNA4 994 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 CAPN12Q6ZSI9 719 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 GPR180Q86V85 440 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 PRIMA1Q86XR5 153 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 LAS2Q8IYD9 372 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 SLC35F6Q8N357 371 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 C9orf106Q8NAJ2 232 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 PDPRQ8NCN5 879 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 OR7G3Q8NG95 312 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 LRRC39Q96DD0 335 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 LRRC46Q96FV0 321 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 WDYHV1Q96HA8 205 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 ZNF597Q96LX8 424 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 RILPQ96NA2 401 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 UGT2B28Q9BY64 529 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 CD244Q9BZW8 370 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 FOXD3Q9UJU5 478 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 FBN3Q75N90 2809 aa12.53□□□□□ -0.4
SAMM50-204ENST00000493161 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-204ENST00000493161 ANKRD33BA6NCL7 494 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 KIAA1324LA8MWY0 1029 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 CXorf49A8MYA2 514 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 PLPP1O14494 284 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 HPNP05981 417 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 CTSSP25774 331 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 SSTR4P31391 388 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 SLCO1A2P46721 670 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 ARL4CP56559 192 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 TNFRSF17Q02223 184 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 FOXF2Q12947 444 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 PDIA2Q13087 525 aaKnown RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 DDX39BQ13838 428 aaKnown RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 CDKL4Q5MAI5 379 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 DEPDC1Q5TB30 811 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 MED27Q6P2C8 311 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 CXorf67Q86X51 503 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 KIF18BQ86Y91 864 aa12.52□□□□□ -0.41
SAMM50-204ENST00000493161 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 ST13P4Q8IZP2 240 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-204ENST00000493161 CIARTQ8N365 385 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms