RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 USP34Q70CQ2 3546 aa4.72□□□□□ -1.65
SND1-216ENST00000492840 EP300Q09472 2414 aaPredicted RBP4.72□□□□□ -1.65
SND1-216ENST00000492840 FLNBO75369 2602 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 IGLV5-52A0A0A0MRZ9 124 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ANKRD61A6NGH8 418 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ZSCAN5BA6NJL1 495 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 C2orf81A6NN90 581 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ANKRD30BLA7E2S9 258 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 C4orf47A7E2U8 309 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 K7EQM0 130 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 PDXKO00764 312 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 OGTO15294 1046 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 RHOBTB1O94844 696 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 MFN2O95140 757 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ADCY5O95622 1261 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 SYF2O95926 243 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 RRASP10301 218 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ODC1P11926 461 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 GP1BBP13224 206 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 HLA-DOBP13765 273 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 HOXB2P14652 356 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ANPEPP15144 967 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 RPA2P15927 270 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ZNF23P17027 643 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ITGB6P18564 788 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 FCARP24071 287 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 FCGR2BP31994 310 aaPredicted RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 VCPP55072 806 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 MAZP56270 477 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 GBE1Q04446 702 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 DDX39BQ13838 428 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 GRB14Q14449 540 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 OPCMLQ14982 345 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 PDK4Q16654 411 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ANKRD55Q3KP44 614 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 SPATS1Q496A3 300 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 AGKQ53H12 422 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 C8orf82Q6P1X6 216 aaPredicted RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 CCDC73Q6ZRK6 1079 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 PIWIL4Q7Z3Z4 852 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 YRDCQ86U90 279 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 LDLRAD3Q86YD5 345 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 DCP1BQ8IZD4 617 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 ZNF444Q8N0Y2 327 aaPredicted RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 RNF149Q8NC42 400 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 OR1J1Q8NGS3 322 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 C16orf52Q8NHV5 167 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 CHPT1Q8WUD6 406 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 SCMH1Q96GD3 660 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ZNF607Q96SK3 696 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 RTP3Q9BQQ7 232 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 CBWD1Q9BRT8 395 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 NUSAP1Q9BXS6 441 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 MRPL13Q9BYD1 178 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 DCLK3Q9C098 648 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 CSTL1Q9H114 145 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 GANQ9H2C0 597 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 PELI2Q9HAT8 420 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 UPF2Q9HAU5 1272 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 CHST11Q9NPF2 352 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 SMARCAL1Q9NZC9 954 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 SLC12A6Q9UHW9 1150 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 ATP6V1HQ9UI12 483 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.71□□□□□ -1.66
SND1-216ENST00000492840 MYH13Q9UKX3 1938 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 TRANK1O15050 2925 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 CHD7Q9P2D1 2997 aa4.71□□□□□ -1.66
SND1-216ENST00000492840 RFX7Q2KHR2 1363 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 C15orf38-AP3S2A0A0A6YYH1 394 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 XKRY2A2RUG3 117 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 OR6C75A6NL08 312 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 ZNF587BE7ETH6 402 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 TNFRSF13BO14836 293 aaPredicted RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 SLC28A2O43868 658 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 RAMP2O60895 175 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 KCNJ13O60928 360 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 CPNE6O95741 557 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 EPOP01588 193 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 CT45A8P0DMV1 189 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 CT45A9P0DMV2 189 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 ATP6V1C1P21283 382 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 PAX7P23759 505 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 GYG1P46976 350 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 ACLYP53396 1101 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 GEMP55040 296 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 ELLP55199 621 aaPredicted RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 EEF1A1P68104 462 aaKnown RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 RELQ04864 619 aaPredicted RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 TRAF3Q13114 568 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 KEAP1Q14145 624 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 RBMS2Q15434 407 aaKnown RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 SPHARQ15513 63 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 GPR33Q49SQ1 333 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 GPAT3Q53EU6 434 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 TDRD12Q587J7 1177 aaKnown RBP4.7□□□□□ -1.66
SND1-216ENST00000492840 CT45A2Q5DJT8 189 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 EEF1A1P5Q5VTE0 462 aa4.7□□□□□ -1.66
SND1-216ENST00000492840 ARHGAP17Q68EM7 881 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms