RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 SPAG8Q99932 426 aaPredicted RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 ZNF577Q9BSK1 485 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 RBM24Q9BX46 236 aaKnown RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 HPS4Q9NQG7 708 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 CTSZQ9UBR2 303 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 RARRES3Q9UL19 164 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 MRPS2Q9Y399 296 aaKnown RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 CPQQ9Y646 472 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 DHX29Q7Z478 1369 aaKnown RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 SPAG9O60271 1321 aaKnown RBP3.23□□□□□ -1.89
CLK1-213ENST00000492793 FGD5Q6ZNL6 1462 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 TRBV5-4A0A0C4DH59 114 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SLC9B1P1A6NJY1 282 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 ZNF724A8MTY0 619 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SHISA9B4DS77 424 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SH2D1BO14796 132 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SYNGR4O95473 234 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 GSTA1P08263 222 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SERPINF2P08697 491 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 ACADSP16219 412 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 CAPN2P17655 700 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 AHCYP23526 432 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 PPP2R1BP30154 601 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 HSPA1LP34931 641 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 TKTL1P51854 596 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SSTP61278 116 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 NME3Q13232 169 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 PDK1Q15118 436 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 TMEM44Q2T9K0 475 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 KRTAP27-1Q3LI81 207 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 GLIPR1L2Q4G1C9 344 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 LIPJQ5W064 366 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 EMBQ6PCB8 327 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 CWC27Q6UX04 472 aaKnown RBP3.23□□□□□ -1.89
CLK1-213ENST00000492793 DLEU7Q6UYE1 221 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 WDR88Q6ZMY6 472 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 NUFIP2Q7Z417 695 aaKnown RBP3.23□□□□□ -1.89
CLK1-213ENST00000492793 TAF8Q7Z7C8 310 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 RPAINQ86UA6 219 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 GTSCR1Q86UQ5 136 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 ITIH5Q86UX2 942 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 Q8N377 158 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 OR4Q3Q8NH05 313 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 OR2L2Q8NH16 312 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 RDH11Q8TC12 318 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SLC13A3Q8WWT9 602 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 C11orf52Q96A22 123 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 NSMCE2Q96MF7 247 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 JPH2Q9BR39 696 aaPredicted RBP3.23□□□□□ -1.89
CLK1-213ENST00000492793 ADNPQ9H2P0 1102 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 TNMDQ9H2S6 317 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 RNF41Q9H4P4 317 aaPredicted RBP3.23□□□□□ -1.89
CLK1-213ENST00000492793 DCTPP1Q9H773 170 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 HOMER3Q9NSC5 361 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 SEC14L4Q9UDX3 406 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 ODF2LQ9ULJ1 636 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.23□□□□□ -1.89
CLK1-213ENST00000492793 RPH3AQ9Y2J0 694 aaPredicted RBP3.23□□□□□ -1.89
CLK1-213ENST00000492793 SLC6A5Q9Y345 797 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 STYXL1Q9Y6J8 313 aa3.23□□□□□ -1.89
CLK1-213ENST00000492793 RALGAPA1Q6GYQ0 2036 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 AFF2P51816 1311 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 SALL1Q9NSC2 1324 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 KRT87PA6NCN2 255 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 CFAP73A6NFT4 308 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 EPM2AB3EWF7 344 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 PI15O43692 258 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 HTATSF1O43719 755 aaKnown RBP3.22□□□□□ -1.89
CLK1-213ENST00000492793 NME2P1O60361 137 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 OR6B1O95007 311 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 IGHV3-13P01766 116 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 MT-ND1P03886 318 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 ALPPP05187 535 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 ALPPL2P10696 532 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 LMO2P25791 158 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 SFNP31947 248 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 ETV5P41161 510 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 TNFRSF4P43489 277 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 SLC7A2P52569 658 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 ZNF131P52739 623 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 SLC12A3P55017 1021 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 RIGQ13278 110 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 MSLNQ13421 630 aaPredicted RBP3.22□□□□□ -1.89
CLK1-213ENST00000492793 KLF5Q13887 457 aaPredicted RBP3.22□□□□□ -1.89
CLK1-213ENST00000492793 CDC37Q16543 378 aaPredicted RBP3.22□□□□□ -1.89
CLK1-213ENST00000492793 CNPY1Q3B7I2 92 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 POM121L1PQ3SYA9 428 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 EPC2Q52LR7 807 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 UNC50Q53HI1 259 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 TEX35Q5T0J7 233 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 OR6B2Q6IFH4 312 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 TIPARPQ7Z3E1 657 aaKnown RBP3.22□□□□□ -1.89
CLK1-213ENST00000492793 LUZP1Q86V48 1076 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 GPATCH11Q8N954 259 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 MLKLQ8NB16 471 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 CHDHQ8NE62 594 aaPredicted RBP3.22□□□□□ -1.89
CLK1-213ENST00000492793 OR52E1Q8NGJ3 308 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 KIAA1524Q8TCG1 905 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 RAB3CQ96E17 227 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 RBM18Q96H35 190 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms