RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MADCAM1Q13477 382 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SNTB1Q13884 538 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 GK2Q14410 553 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 GRIN2CQ14957 1233 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 TMEM132DQ14C87 1099 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 EIF2S3LQ2VIR3 472 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 PRAMEF19Q5SWL8 479 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 EEF1A1P5Q5VTE0 462 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 TRIM46Q7Z4K8 759 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 OR4N4Q8N0Y3 316 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 NKAPQ8N5F7 415 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 TRPV1Q8NER1 839 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 ELMOD3Q96FG2 381 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 DDOQ99489 341 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 BTBD1Q9H0C5 482 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 NSUN3Q9H649 340 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 ZNF334Q9HCZ1 680 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 LATS2Q9NRM7 1088 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 GOLGB1Q14789 3259 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 C17orf113A0A1B0GUU1 675 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 MTMR11A4FU01 709 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CDC7O00311 574 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 OR7A17O14581 309 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 PRAF2O60831 178 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SC5DO75845 299 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 THP07101 528 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SYPP08247 313 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 GIPP09681 153 aaPredicted RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 STAG3L1P0CL83 205 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SPP1P10451 314 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 PVALBP20472 110 aaPredicted RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 S100A11P31949 105 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CDKN2CP42773 168 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 P2RY4P51582 365 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CRISP1P54107 249 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 WNT3AP56704 352 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CLDN8P56748 225 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 ZNF155Q12901 538 aaPredicted RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 ECH1Q13011 328 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SLC27A1Q6PCB7 646 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SLC16A13Q7RTY0 426 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 LRRC28Q86X40 367 aaPredicted RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 SKA3Q8IX90 412 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CRYBG2Q8N1P7 616 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 PNPLA1Q8N8W4 532 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 GPR26Q8NDV2 337 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 CHFRQ96EP1 664 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CDK15Q96Q40 435 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 DOHHQ9BU89 302 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 EXOSC3Q9NQT5 275 aaKnown RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 PDGFCQ9NRA1 345 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CA5BQ9Y2D0 317 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 MED16Q9Y2X0 877 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 PHIPQ8WWQ0 1821 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 NPEPPSL1A6NEC2 478 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 HMSDA8MTL9 139 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 MAFKO60675 156 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 HLA-DQB2P05538 268 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 HEXAP06865 529 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 ELK1P19419 428 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 DDX6P26196 483 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS8-225ENST00000492449 S100A3P33764 101 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CNR2P34972 360 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 HMGA2P52926 109 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 RABGGTBP53611 331 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 RPS25P62851 125 aaKnown RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 TRAM2Q15035 370 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 OCLNQ16625 522 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SYTL3Q4VX76 610 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 FBXO48Q5FWF7 155 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 MRNIPQ6NTE8 343 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 HAGHLQ6PII5 290 aaPredicted RBP9.23□□□□□ -0.93
VPS8-225ENST00000492449 PAQR3Q6TCH7 311 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 UQCC3Q6UW78 93 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 TBC1D19Q8N5T2 526 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 BMPERQ8N8U9 685 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SYT14Q8NB59 555 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 OR5M3Q8NGP4 307 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 TMEM41AQ96HV5 264 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 SLC6A18Q96N87 628 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 THSD1Q9NS62 852 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 NRBP2Q9NSY0 501 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 MED11Q9P086 117 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 PIPOXQ9P0Z9 390 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CBLCQ9ULV8 474 aa9.23□□□□□ -0.93
VPS8-225ENST00000492449 CASKO14936 926 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 SUV39H1O43463 412 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 SSNA1O43805 119 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 SUSD5O60279 629 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 KDM4BO94953 1096 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 ALDOBP05062 364 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 ZNF806P0C7X5 589 aa9.22□□□□□ -0.93
VPS8-225ENST00000492449 KCNJ3P48549 501 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms