RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 STSP08842 583 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 SLC35E2P0CK97 266 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 PIK3R1P27986 724 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 HMGCS1Q01581 520 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 ASPHQ12797 758 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 ERCC6LQ2NKX8 1250 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 FRMD7Q6ZUT3 714 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 SIAH3Q8IW03 269 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 OR5L2Q8NGL0 311 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 CHTF18Q8WVB6 975 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 TM4SF18Q96CE8 201 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 ART5Q96L15 291 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 TNFRSF12AQ9NP84 129 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 NMRK1Q9NWW6 199 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 NPIPA1Q9UND3 350 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 KLF13Q9Y2Y9 288 aaPredicted RBP22.86■■□□□ 1.25
UPF3A-209ENST00000492270 PCDHA9Q9Y5H5 950 aa22.86■■□□□ 1.25
UPF3A-209ENST00000492270 A1L4Q6 167 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 ESPNB1AK53 854 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 CT62P0C5K7 136 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 CPA3P15088 417 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 ZNF24P17028 368 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 EMBQ6PCB8 327 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 TRABD2AQ86V40 505 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 FJX1Q86VR8 437 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 PSD4Q8NDX1 1056 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 OR4K14Q8NGD5 310 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 RDH11Q8TC12 318 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 CAVIN3Q969G5 261 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 GPR137Q96N19 417 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 DEPPQ9NTK1 212 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 OXSMQ9NWU1 459 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 CES1P1Q9UKY3 287 aa22.85■■□□□ 1.25
UPF3A-209ENST00000492270 ZNHIT1O43257 154 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 PEX1O43933 1283 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 SSTR4P31391 388 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 PTGER1P34995 402 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 XKP51811 444 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 SLC37A1P57057 533 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 DNAJB13P59910 316 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 RAE1P78406 368 aaKnown RBP22.84■■□□□ 1.25
UPF3A-209ENST00000492270 IFFO1Q0D2I5 559 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 PCLAFQ15004 111 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 HIST2H2BCQ6DN03 193 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 SLC48A1Q6P1K1 146 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 RNF111Q6ZNA4 994 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 GPALPP1Q8IXQ4 340 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 RIBC1Q8N443 379 aaPredicted RBP22.84■■□□□ 1.25
UPF3A-209ENST00000492270 NUBPLQ8TB37 319 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 APIPQ96GX9 242 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 APOPT1Q96IL0 206 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 GAL3ST4Q96RP7 486 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 SHCBP1LQ9BZQ2 653 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 CXorf21Q9HAI6 301 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 TIMMDC1Q9NPL8 285 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 LGALS13Q9UHV8 139 aa22.84■■□□□ 1.25
UPF3A-209ENST00000492270 NCKAP5O14513 1909 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 A0A0G2JMM0 328 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 A0A1W2PPB8 328 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 A0A1W2PRS3 328 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 C1orf226A1L170 272 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 KIR3DP1A8MWS1 328 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 NADKO95544 446 aaPredicted RBP22.83■■□□□ 1.25
UPF3A-209ENST00000492270 GP1BBP13224 206 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 CPMP14384 443 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 GALNSP34059 522 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 HSF1Q00613 529 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 CFAP157Q5JU67 520 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 FAM180BQ6P0A1 224 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 C10orf107Q8IVU9 208 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 GALNT12Q8IXK2 581 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 GBP7Q8N8V2 638 aaPredicted RBP22.83■■□□□ 1.25
UPF3A-209ENST00000492270 BANPQ8N9N5 519 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 HEY2Q9UBP5 337 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 PLEKHB1Q9UF11 243 aaPredicted RBP22.83■■□□□ 1.25
UPF3A-209ENST00000492270 MCM8Q9UJA3 840 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 SH3BGRL2Q9UJC5 107 aa22.83■■□□□ 1.25
UPF3A-209ENST00000492270 TRGV8A0A0C4DH27 118 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 PINLYPA6NC86 204 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 G3V3Y1 287 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 KLRC4-KLRK1H3BQV0 150 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 PCDH7O60245 1069 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 GUCY1B2O75343 617 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 ERAL1O75616 437 aaKnown RBP22.82■■□□□ 1.24
UPF3A-209ENST00000492270 SERPINB3P29508 390 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 ALDH9A1P49189 494 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 DUSP2Q05923 314 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 BTKQ06187 659 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 EBPQ15125 230 aaKnown RBP22.82■■□□□ 1.24
UPF3A-209ENST00000492270 MPEG1Q2M385 716 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 PIGGQ5H8A4 983 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 LIPMQ5VYY2 423 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 SRRM1Q8IYB3 904 aaKnown RBP22.82■■□□□ 1.24
UPF3A-209ENST00000492270 EBPLQ9BY08 206 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 PARD6BQ9BYG5 372 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 WWTR1Q9GZV5 400 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.82■■□□□ 1.24
UPF3A-209ENST00000492270 MKS1Q9NXB0 559 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 PLLPQ9Y342 182 aa22.82■■□□□ 1.24
UPF3A-209ENST00000492270 NBPF19A0A087WUL8 3843 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms