RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 MS4A6EQ96DS6 147 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 MARK4Q96L34 752 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 QRFPRQ96P65 431 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 GNRHR2Q96P88 292 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 TM9SF2Q99805 663 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 UBQLN3Q9H347 655 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 PELI2Q9HAT8 420 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 PACSIN3Q9UKS6 424 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 JRKLQ9Y4A0 524 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 LDB3O75112 727 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 BANF1O75531 89 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 ENO2P09104 434 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-222ENST00000491867 SERPINB3P29508 390 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 MSH2P43246 934 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 RPL21P46778 160 aaKnown RBP12.61□□□□□ -0.39
ATG4B-222ENST00000491867 FNTAP49354 379 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 PGGT1BP53609 377 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 PLA2G16P53816 162 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 NAGLUP54802 743 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 LIM2P55344 173 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 RUNX1T1Q06455 604 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
ATG4B-222ENST00000491867 SERTAD2Q14140 314 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 SPANXN3Q5MJ09 141 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 BICRALQ6AI39 1079 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 NXPE4Q6UWF7 544 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 LRRC8AQ8IWT6 810 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
ATG4B-222ENST00000491867 CCT6BQ92526 530 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 DIO2Q92813 273 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 ANKRD9Q96BM1 317 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-222ENST00000491867 CERS2Q96G23 380 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 SENP5Q96HI0 755 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-222ENST00000491867 NAT9Q9BTE0 207 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 TRIM54Q9BYV2 358 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 SLC17A6Q9P2U8 582 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 DYRK1BQ9Y463 629 aa12.61□□□□□ -0.39
ATG4B-222ENST00000491867 A0A088AWK7 358 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 ANKRD33BA6NCL7 494 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 LRIT2A6NDA9 550 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 A8MV72 311 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-222ENST00000491867 GUCA1CO95843 209 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 ZNF10P21506 573 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-222ENST00000491867 CERS1P27544 350 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 FNDC7Q5VTL7 733 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 SBSNQ6UWP8 590 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 GPATCH11Q8N954 259 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 WNT2BQ93097 391 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 ZBED6CLQ96FA7 236 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-222ENST00000491867 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
ATG4B-222ENST00000491867 RILPQ96NA2 401 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 FAM111AQ96PZ2 611 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 PLAC1Q9HBJ0 212 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 CORO1CQ9ULV4 474 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-222ENST00000491867 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
ATG4B-222ENST00000491867 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 GOLGA6L10A0A0M3HER8 536 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 H0Y3Z8 333 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 HRKO00198 91 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 MSTNO14793 375 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 TNFSF13O75888 250 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 SMNDC1O75940 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATG4B-222ENST00000491867 IGKV3-11P04433 115 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 COX7A2P14406 83 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 CCKARP32238 428 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 CD79BP40259 229 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 MASP1P48740 699 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 SRYQ05066 204 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 GAB1Q13480 694 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 RCN2Q14257 317 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 PPP1R7Q15435 360 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 NTRK2Q16620 822 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 PPP1R3AQ16821 1122 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 TBCELQ5QJ74 424 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 TMEM64Q6YI46 380 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 ZNF550Q7Z398 422 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
ATG4B-222ENST00000491867 IGDCC3Q8IVU1 814 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 ACTRT1Q8TDG2 376 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 PDLIM5Q96HC4 596 aaKnown RBP12.59□□□□□ -0.39
ATG4B-222ENST00000491867 GAL3ST4Q96RP7 486 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 SERINC2Q96SA4 455 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 PPANQ9NQ55 473 aaKnown RBP12.59□□□□□ -0.39
ATG4B-222ENST00000491867 ASIC3Q9UHC3 531 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 IKZF3Q9UKT9 509 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 VWA7Q9Y334 891 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 IKBKGQ9Y6K9 419 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 SVEP1Q4LDE5 3571 aa12.59□□□□□ -0.39
ATG4B-222ENST00000491867 A0A1W2PNV4 684 aa12.58□□□□□ -0.4
ATG4B-222ENST00000491867 DNALI1O14645 258 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms