RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 TIMP4Q99727 224 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 MDFIQ99750 246 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 MAPKAP1Q9BPZ7 522 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 EHD1Q9H4M9 534 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 PRDM7Q9NQW5 492 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 TXNDC16Q9P2K2 825 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.29
SSR4-212ENST00000491833 CAMK2AQ9UQM7 478 aa13.27□□□□□ -0.29
SSR4-212ENST00000491833 MBD3L4A6NDZ8 208 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 MBD3L3A6NE82 208 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 MBD3L5A6NJ08 208 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 CLGNO14967 610 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 FGF17O60258 216 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 LY6G6DO95868 133 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 FBXO45P0C2W1 286 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 CPN2P22792 545 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 CTSSP25774 331 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 OPRM1P35372 400 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 MSH2P43246 934 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 IGLV3-21P80748 117 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 TSNQ15631 228 aaKnown RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 MSS51Q4VC12 460 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 ZDHHC24Q6UX98 284 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 ZNF793Q6ZN11 406 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 SLC29A4Q7RTT9 530 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 LRRN4CLQ8ND94 238 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 MBD3L2Q8NHZ7 208 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 CDKL2Q92772 493 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 ANKRD9Q96BM1 317 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 RHBDF1Q96CC6 855 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 PTCD3Q96EY7 689 aaKnown RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 SENP5Q96HI0 755 aaPredicted RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 FBXL20Q96IG2 436 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 F2RL3Q96RI0 385 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 WDR83Q9BRX9 315 aaKnown RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 TBCDQ9BTW9 1192 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 EFCAB11Q9BUY7 163 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 PROK2Q9HC23 129 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 CTNNAL1Q9UBT7 734 aa13.26□□□□□ -0.29
SSR4-212ENST00000491833 CNOT11Q9UKZ1 510 aaKnown RBP13.26□□□□□ -0.29
SSR4-212ENST00000491833 NCF1BA6NI72 391 aaPredicted RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 CD8B2A6NJW9 211 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 NCF1CA8MVU1 366 aaPredicted RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 E7ESA3 106 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 ERN1O75460 977 aaKnown RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 IL18BPO95998 194 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 C1QAP02745 245 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 NCF1P14598 390 aaPredicted RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 ATP5A1P25705 553 aaKnown RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 PCSK6P29122 969 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 STX2P32856 288 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 PHBP35232 272 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 AGFG1P52594 562 aaKnown RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 ZNF460Q14592 562 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 FASTKD3Q14CZ7 662 aaKnown RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 NTRK2Q16620 822 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 CXorf67Q86X51 503 aaPredicted RBP13.25□□□□□ -0.29
SSR4-212ENST00000491833 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 VWA5B2Q8N398 1253 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 ACOT4Q8N9L9 421 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 SMPDL3BQ92485 455 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 DIO2Q92813 273 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 DACH2Q96NX9 599 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 TMEM79Q9BSE2 394 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 EPB41L4BQ9H329 900 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 DNAJC11Q9NVH1 559 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 WWOXQ9NZC7 414 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 JKAMPQ9P055 326 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 NFU1Q9UMS0 254 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 TEX264Q9Y6I9 313 aa13.25□□□□□ -0.29
SSR4-212ENST00000491833 KIAA1549Q9HCM3 1950 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 FAM95CA0A1B0GW59 222 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 SH3D21A4FU49 640 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 H7C1Q1 480 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 RTCAO00442 366 aaKnown RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 TP53I11O14683 189 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 TRIM3O75382 744 aaPredicted RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 TRAPPC6AO75865 159 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 SCELO95171 688 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 HPNP05981 417 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 HIST1H1TP22492 207 aaPredicted RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 SSR2P43308 183 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 MAGEA4P43358 317 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 CPA2P48052 419 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 PPP2R2BQ00005 443 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 RCAN2Q14206 197 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 RPS6KA2Q15349 733 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 TGFBIQ15582 683 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 TRADDQ15628 312 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 VASNQ6EMK4 673 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 RNF111Q6ZNA4 994 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 CXXC5Q7LFL8 322 aaKnown RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 OR4N5Q8IXE1 308 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 TCAIMQ8N3R3 496 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 SNX31Q8N9S9 440 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 SIMC1Q8NDZ2 872 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 ISL2Q96A47 359 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms