RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TTTY12Q9BZ98 90 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 WDR41Q9HAD4 459 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 ZNF225Q9UK10 706 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 RIPK2O43353 540 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 OR10H2O60403 315 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 TPOP07202 933 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 FAM153BP0C7A2 387 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 SLC35E2P0CK97 266 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 DNASE1L1P49184 302 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 IFT88Q13099 833 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 FAM153CQ494X1 144 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 EMC4Q5J8M3 183 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 LGSNQ5TDP6 509 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 TRMT10CQ7L0Y3 403 aaKnown RBP16.62■□□□□ 0.25
HMGN1-219ENST00000491183 CD163Q86VB7 1156 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 IFT20Q8IY31 132 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 METTL4Q8N3J2 472 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 SLC15A4Q8N697 577 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 ZDHHC11Q9H8X9 412 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 SH2D2AQ9NP31 389 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 CHST11Q9NPF2 352 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
HMGN1-219ENST00000491183 TUBA8Q9NY65 449 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-219ENST00000491183 DNAJC13O75165 2243 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 IQANK1A0A1B0GTG1 560 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 C19orf84I3L1E1 186 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 CLDN14O95500 239 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 OTCP00480 354 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 PDYNP01213 254 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 P04436 131 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 HSD17B3P37058 310 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 PIGAP37287 484 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 EBPQ15125 230 aaKnown RBP16.61■□□□□ 0.25
HMGN1-219ENST00000491183 C10orf62Q5T681 223 aaPredicted RBP16.61■□□□□ 0.25
HMGN1-219ENST00000491183 NDUFAF5Q5TEU4 345 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 ARHGAP11AQ6P4F7 1023 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 RNF111Q6ZNA4 994 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 RGS9BPQ6ZS82 235 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 GK5Q6ZS86 529 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 FAM47EQ6ZV65 393 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 MCEMP1Q8IX19 187 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 MARVELD2Q8N4S9 558 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 TMEM251Q8N6I4 163 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 MYRIPQ8NFW9 859 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 TXLNGYQ9BZA5 131 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 WWTR1Q9GZV5 400 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 EPB41L4BQ9H329 900 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 ELOVL6Q9H5J4 265 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 CXorf21Q9HAI6 301 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 IL1RL2Q9HB29 575 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.61■□□□□ 0.25
HMGN1-219ENST00000491183 AHSPQ9NZD4 102 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 ADAM29Q9UKF5 820 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 LIPGQ9Y5X9 500 aa16.61■□□□□ 0.25
HMGN1-219ENST00000491183 CACNA1CQ13936 2221 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 DLX3O60479 287 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 OR4F21O95013 312 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 CT62P0C5K7 136 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 RHOXF2BP0C7M4 288 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SSTR4P31391 388 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 MAGEA5P43359 124 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 CLCQ05315 142 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 GALNT1Q10472 559 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-219ENST00000491183 TBL3Q12788 808 aaKnown RBP16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SLC29A2Q14542 456 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 HYAL4Q2M3T9 481 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 UNC50Q53HI1 259 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 CCNYL2Q5T2Q4 361 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SLC22A10Q63ZE4 541 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 PAOXQ6QHF9 649 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SLC29A4Q7RTT9 530 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SLC22A16Q86VW1 577 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SRRM1Q8IYB3 904 aaKnown RBP16.6■□□□□ 0.25
HMGN1-219ENST00000491183 TRPC4APQ8TEL6 797 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 PAQR8Q8TEZ7 354 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SELENOMQ8WWX9 145 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 MTBPQ96DY7 904 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SPACA9Q96E40 222 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-219ENST00000491183 GAL3ST4Q96RP7 486 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 RHOXF2Q9BQY4 288 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 PROK2Q9HC23 129 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 CES1P1Q9UKY3 287 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 SLC12A4Q9UP95 1085 aa16.6■□□□□ 0.25
HMGN1-219ENST00000491183 OR6C76A6NM76 312 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 ACOT7O00154 380 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 IGHG3P01860 377 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 SNRPB2P08579 225 aaKnown RBP16.59■□□□□ 0.25
HMGN1-219ENST00000491183 CELA3AP09093 270 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 PIK3R1P27986 724 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 KIR3DL1P43629 444 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 XKP51811 444 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 TCHHL1Q5QJ38 904 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-219ENST00000491183 ZNF678Q5SXM1 525 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 COMMD6Q7Z4G1 85 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 MMP21Q8N119 569 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 EID3Q8N140 333 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms