RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SLC29A3Q9BZD2 475 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 SLC19A3Q9BZV2 496 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 RC3H2Q9HBD1 1191 aaKnown RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 RLIMQ9NVW2 624 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 KLHL21Q9UJP4 597 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 ACSL6Q9UKU0 697 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 MAP4K5Q9Y4K4 846 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 PCDHGB2Q9Y5G2 931 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 TRAV19A0A0A6YYK7 116 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 PIPSLA2A3N6 862 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 MRPS14O60783 128 aaKnown RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 RPS3P23396 243 aaKnown RBP eCLIP9.69□□□□□ -0.86
BRD9-209ENST00000490814 PBX2P40425 430 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 SOX3P41225 446 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 NSG1P42857 185 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 PER3P56645 1201 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 DUSP6Q16828 381 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 TXNDC8Q6A555 127 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 TIGD3Q6B0B8 471 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 TEX261Q6UWH6 196 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 ANKRD33Q7Z3H0 272 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 SLC34A3Q8N130 599 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 LGI4Q8N135 537 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 NAGSQ8N159 534 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 B3GNT7Q8NFL0 401 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 OR9Q2Q8NGE9 314 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 OR4A15Q8NGL6 344 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 SETD6Q8TBK2 473 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 ASB15Q8WXK1 588 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 USP7Q93009 1102 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 TMEM203Q969S6 136 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 NPAS1Q99742 590 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 P2RY13Q9BPV8 354 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 CCM2Q9BSQ5 444 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 RDH8Q9NYR8 311 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 MBD1Q9UIS9 605 aaPredicted RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 U3KQ87 197 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 NINQ8N4C6 2090 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 TRBV5-3A0A0A0MS03 114 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 H7C0S8 307 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 H7C4K7 107 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 UGT2B17O75795 530 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 AP2A2O94973 939 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 VNN2O95498 520 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 SERPINA4P29622 427 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 NUP62P37198 522 aaPredicted RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 RAB14P61106 215 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 HOXC5Q00444 222 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 GRK1Q15835 563 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 UGT8Q16880 541 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 SMG7Q92540 1137 aaKnown RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 CMTM7Q96FZ5 175 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 HRASLS5Q96KN8 279 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 DCLRE1CQ96SD1 692 aaKnown RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 C11orf54Q9H0W9 315 aaPredicted RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 VPS29Q9UBQ0 182 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 GLS2Q9UI32 602 aa9.69□□□□□ -0.86
BRD9-209ENST00000490814 ELF5Q9UKW6 265 aaPredicted RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 URB1O60287 2271 aaKnown RBP9.69□□□□□ -0.86
BRD9-209ENST00000490814 PITPNM1O00562 1244 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 SGCEO43556 437 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 PCDH7O60245 1069 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 FZD6O60353 706 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 GPX5O75715 221 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 ETFAP13804 333 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 CHI3L1P36222 383 aaPredicted RBP9.68□□□□□ -0.86
BRD9-209ENST00000490814 GGT2P36268 569 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 BPIFB3P59826 476 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 AP1S1P61966 158 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 PPIGQ13427 754 aaKnown RBP eCLIP9.68□□□□□ -0.867e-7■■□□□ 14
BRD9-209ENST00000490814 VEPH1Q14D04 833 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 SYTL3Q4VX76 610 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 LRIF1Q5T3J3 769 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 HES5Q5TA89 166 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 PYHIN1Q6K0P9 492 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 PTCHD4Q6ZW05 846 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 GLCCI1Q86VQ1 547 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 OR6M1Q8NGM8 313 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 PHOSPHO2Q8TCD6 241 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 CSGALNACT1Q8TDX6 532 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 SCAMP4Q969E2 229 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 TOX2Q96NM4 488 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 NXF2Q9GZY0 626 aaKnown RBP9.68□□□□□ -0.86
BRD9-209ENST00000490814 MTIF3Q9H2K0 278 aaKnown RBP9.68□□□□□ -0.86
BRD9-209ENST00000490814 IGFLR1Q9H665 355 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 BRD9Q9H8M2 597 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 SLC28A3Q9HAS3 691 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 SGK2Q9HBY8 427 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 F5P12259 2224 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 TDRD15B5MCY1 1934 aaKnown RBP9.68□□□□□ -0.86
BRD9-209ENST00000490814 GREB1Q4ZG55 1949 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 PIKFYVEQ9Y2I7 2098 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 CHD7Q9P2D1 2997 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 J3KTA2 159 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 GAPDHSO14556 408 aaPredicted RBP9.68□□□□□ -0.86
BRD9-209ENST00000490814 IGSF6O95976 241 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 AMD1P17707 334 aa9.68□□□□□ -0.86
BRD9-209ENST00000490814 ZP3P21754 424 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms