RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PCBP2Q15366 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 TESK1Q15569 626 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 INAQ16352 499 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 WHAMMP3Q1A5X7 153 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 AP5B1Q2VPB7 878 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 FAM153CQ494X1 144 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 PAGE2BQ5JRK9 111 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 KHDRBS2Q5VWX1 349 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 MRM1Q6IN84 353 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 GTF2H2CQ6P1K8 395 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 BEND4Q6ZU67 534 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 MRGPRGQ86SM5 289 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 DOLPP1Q86YN1 238 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 MYLK4Q86YV6 388 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 LGI4Q8N135 537 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 OR52B6Q8NGF0 335 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 RHEBL1Q8TAI7 183 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 WDR20Q8TBZ3 569 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 ZNF721Q8TF20 911 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 VMP1Q96GC9 406 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 TBCDQ9BTW9 1192 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 OR8D2Q9GZM6 311 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 PITHD1Q9GZP4 211 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 ACSS3Q9H6R3 686 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 NOL11Q9H8H0 719 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 IPPKQ9H8X2 491 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 COPS7BQ9H9Q2 264 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 LYRM4Q9HD34 91 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 ADAP2Q9NPF8 381 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 SEMA4BQ9NPR2 832 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 DMRT3Q9NQL9 472 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 FARSBQ9NSD9 589 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 ASB4Q9Y574 426 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 PCDHGB6Q9Y5F9 930 aa6.78□□□□□ -1.32
PRPF4B-208ENST00000490653 ZNF407Q9C0G0 2248 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 A0A1B0GTH9 108 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 C17orf105B2RV13 164 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TRIM49D1C9J1S8 452 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 PROM1O43490 865 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SLC19A2O60779 497 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SCELO95171 688 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 NADKO95544 446 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CLPSP04118 112 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CT62P0C5K7 136 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 GSTM2P28161 218 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SSR2P43308 183 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SERPINB8P50452 374 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ALDH18A1P54886 795 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 RNF4P78317 190 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 FOLH1Q04609 750 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ASPHQ12797 758 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ELAVL1Q15717 326 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 FAM83EQ2M2I3 478 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 KRTCAP3Q53RY4 240 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CMPK2Q5EBM0 449 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SGO1Q5FBB7 561 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 LIPJQ5W064 366 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ANKRD34AQ69YU3 496 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM64Q6YI46 380 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 Q6ZPB1 254 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 MCEMP1Q8IX19 187 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 MMP21Q8N119 569 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CYP4Z2PQ8N1L4 340 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM132CQ8N3T6 1108 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 RPRMLQ8N4K4 120 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM156Q8N614 296 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 L3MBTL4Q8NA19 623 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM178AQ8NBL3 297 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 C16orf52Q8NHV5 167 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SLC2A12Q8TD20 617 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 RGMAQ96B86 450 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CMTM7Q96FZ5 175 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SENP5Q96HI0 755 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 SCYL1Q96KG9 808 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 KCNC2Q96PR1 638 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 RASL10BQ96S79 203 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 PAFAH2Q99487 392 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 RPF2Q9H7B2 306 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ACTR8Q9H981 624 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM216Q9P0N5 145 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 TNFRSF10DQ9UBN6 386 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ZNF225Q9UK10 706 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 NFU1Q9UMS0 254 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ENTPD4Q9Y227 616 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 YARS2Q9Y2Z4 477 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 ANGPTL3Q9Y5C1 460 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 LIPGQ9Y5X9 500 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CLCA3PQ9Y6N3 262 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 CCDC168Q8NDH2 2452 aa6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 NCOA6Q14686 2063 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-208ENST00000490653 NCKAP5O14513 1909 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 FREM3P0C091 2139 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 DNAJC13O75165 2243 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 A0A088AWK7 358 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 A0A0A6YYD5 115 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms