RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STXBP2Q15833 593 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 C14orf28Q4W4Y0 310 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CT45A2Q5DJT8 189 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CGB2Q6NT52 195 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 SLC22A18ASQ8N1D0 253 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CAPNS2Q96L46 248 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CNOT6LQ96LI5 555 aaKnown RBP3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CXorf58Q96LI9 332 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 DDX50Q9BQ39 737 aaKnown RBP3.79□□□□□ -1.8
CCDC39-206ENST00000489868 PNNQ9H307 717 aaKnown RBP3.79□□□□□ -1.8
CCDC39-206ENST00000489868 ABCB10Q9NRK6 738 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 MLXQ9UH92 298 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 EXOC7Q9UPT5 735 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 ITM2BQ9Y287 266 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 FGD5Q6ZNL6 1462 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 RNF212BA8MTL3 300 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 PSMD3O43242 534 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 PDGFBP01127 241 aaPredicted RBP3.78□□□□□ -1.8
CCDC39-206ENST00000489868 TPBGLP0DKB5 382 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 UROSP10746 265 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 TRIM23P36406 574 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 BRCC3P46736 316 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 PPIAP62937 165 aaKnown RBP3.78□□□□□ -1.8
CCDC39-206ENST00000489868 HSPA14Q0VDF9 509 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 GK2Q14410 553 aaPredicted RBP3.78□□□□□ -1.8
CCDC39-206ENST00000489868 SLMAPQ14BN4 828 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 STX1AQ16623 288 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 ZNF671Q8TAW3 534 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 SERAC1Q96JX3 654 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 JPH2Q9BR39 696 aaPredicted RBP3.78□□□□□ -1.8
CCDC39-206ENST00000489868 OSBPL8Q9BZF1 889 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 MAGEF1Q9HAY2 307 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 SPG21Q9NZD8 308 aa3.78□□□□□ -1.8
CCDC39-206ENST00000489868 EIF3KQ9UBQ5 218 aaKnown RBP3.78□□□□□ -1.8
CCDC39-206ENST00000489868 C5orf51A6NDU8 294 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 RHBDL1O75783 438 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 CYP3A5P20815 502 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 KCNK10P57789 538 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 FAM219BQ5XKK7 198 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 C11orf88Q6PI97 169 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 KRTAP11-1Q8IUC1 163 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 STHQ8IWL8 128 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 ICA1LQ8NDH6 482 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 GLYATL1Q969I3 302 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 ZBED6CLQ96FA7 236 aaPredicted RBP3.77□□□□□ -1.81
CCDC39-206ENST00000489868 PPP1R16AQ96I34 528 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 FUT8Q9BYC5 575 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 NAPBQ9H115 298 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 Q9HAA7 133 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 ADGRL4Q9HBW9 690 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 AMBNQ9NP70 447 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 DDX28Q9NUL7 540 aaKnown RBP3.77□□□□□ -1.81
CCDC39-206ENST00000489868 RSPH14Q9UHP6 348 aa3.77□□□□□ -1.81
CCDC39-206ENST00000489868 MRTO4Q9UKD2 239 aaKnown RBP3.77□□□□□ -1.81
CCDC39-206ENST00000489868 ATRXP46100 2492 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 MEI4A8MW99 385 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 MUTP22033 750 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 RPL34P49207 117 aaKnown RBP3.76□□□□□ -1.81
CCDC39-206ENST00000489868 SMSP52788 366 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 NME5P56597 212 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 FHL5Q5TD97 284 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 C1orf189Q5VU69 101 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 CD164L2Q6UWJ8 174 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 ABRAXAS1Q6UWZ7 409 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 FBXW8Q8N3Y1 598 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 NAT8LQ8N9F0 302 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 SIDT2Q8NBJ9 832 aaKnown RBP3.76□□□□□ -1.81
CCDC39-206ENST00000489868 BEST4Q8NFU0 473 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 TBCKQ8TEA7 893 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 BCL2L2Q92843 193 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-206ENST00000489868 SLC26A1Q9H2B4 701 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 MMADHCQ9H3L0 296 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-206ENST00000489868 ABCC13Q9NSE7 274 aa3.76□□□□□ -1.81
CCDC39-206ENST00000489868 DIMT1Q9UNQ2 313 aaKnown RBP3.76□□□□□ -1.81
CCDC39-206ENST00000489868 TSPAN2O60636 221 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 AKAP3O75969 853 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 GAS8O95995 478 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 HSP90AB1P08238 724 aaKnown RBP3.75□□□□□ -1.81
CCDC39-206ENST00000489868 TNFRSF4P43489 277 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 STX1BP61266 288 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 GSTO1P78417 241 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 POU5F1Q01860 360 aaKnown RBP3.75□□□□□ -1.81
CCDC39-206ENST00000489868 RCN2Q14257 317 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 AARDQ4LEZ3 155 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 SLC39A12Q504Y0 691 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 ODF2Q5BJF6 829 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 GLRA4Q5JXX5 417 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 MARC1Q5VT66 337 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 RHBDD2Q6NTF9 364 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 STEAP1BQ6NZ63 245 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 TMEM270Q6UE05 265 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 PRSS42Q7Z5A4 293 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 OR6M1Q8NGM8 313 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 COG3Q96JB2 828 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 TEKT2Q9UIF3 430 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 CELA1Q9UNI1 258 aa3.75□□□□□ -1.81
CCDC39-206ENST00000489868 FOXA2Q9Y261 457 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-206ENST00000489868 KIF7Q2M1P5 1343 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 CCT8L1PA6NM43 557 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms