RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 OR5D13Q8NGL4 314 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 OR13J1Q8NGT2 312 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 OR52J3Q8NH60 311 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 FGFBP3Q8TAT2 258 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 RLN3Q8WXF3 142 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SENP5Q96HI0 755 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM71F1Q96KD3 344 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 IFT74Q96LB3 600 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SENP8Q96LD8 212 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 GPR137Q96N19 417 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CMKLR1Q99788 373 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 BPIFA3Q9BQP9 254 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM192AQ9GZU8 254 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRA2Q9H9E1 313 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CLK4Q9HAZ1 481 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 AGPAT3Q9NRZ7 376 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 RCC2Q9P258 522 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 TRAF3IP3Q9Y228 551 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 MRPS7Q9Y2R9 242 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 PCDHGB1Q9Y5G3 927 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 KLF2Q9Y5W3 355 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 BRD4O60885 1362 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 USP54Q70EL1 1684 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 PLCH1Q4KWH8 1693 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 COL5A2P05997 1499 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 A0A075B6Q4 140 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 A0A1B0GTQ1 180 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ANTXRLA6NF34 631 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 C5orf60A6NFR6 353 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ABCD4O14678 606 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 KCNN4O15554 427 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ZBTB11O95625 1053 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PPP1R3DO95685 299 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 GLUD1P00367 558 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 CAPN1P07384 714 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 RALAP11233 206 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 F3P13726 295 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF18P17022 549 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 HSD17B3P37058 310 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 GRIA1P42261 906 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 RPS5P46782 204 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 GLUD2P49448 558 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PEX5P50542 639 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ART1P52961 327 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 P2RY14Q15391 338 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 STX1AQ16623 288 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PCK2Q16822 640 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 MPPE1Q53F39 396 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 HIKESHIQ53FT3 197 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 FSCBQ5H9T9 825 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 NKAIN2Q5VXU1 208 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 CAPN13Q6MZZ7 669 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ZSCAN25Q6NSZ9 544 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC39A4Q6P5W5 647 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PACS1Q6VY07 963 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 Q75L30 129 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ZC3H3Q8IXZ2 948 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 AADATQ8N5Z0 425 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC5A8Q8N695 610 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 LMNTD1Q8N9Z9 388 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ADAD2Q8NCV1 583 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PAPD5Q8NDF8 572 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 TRPV3Q8NET8 790 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 SUN5Q8TC36 379 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PNPT1Q8TCS8 783 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 WFIKKN2Q8TEU8 576 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 SEMA4DQ92854 862 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 CXorf58Q96LI9 332 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 GPA33Q99795 319 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM43Q9BTV4 400 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 FICDQ9BVA6 458 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 FTHL17Q9BXU8 183 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 CRNKL1Q9BZJ0 848 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ROPN1BQ9BZX4 212 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 TRIM9Q9C026 710 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 C5orf66Q9H5L9 145 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 EXO5Q9H790 373 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 SYNDIG1Q9H7V2 258 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC52A3Q9NQ40 469 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 NRBP2Q9NSY0 501 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 DDX28Q9NUL7 540 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 AGPAT5Q9NUQ2 364 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNHIT6Q9NWK9 470 aaKnown RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 KLHL8Q9P2G9 620 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 NARFQ9UHQ1 456 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 TTC7AQ9ULT0 858 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PLCL2Q9UPR0 1127 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 IFT52Q9Y366 437 aa2.9□□□□□ -1.95
DEPDC1-204ENST00000489862 PFASO15067 1338 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 BRWD3Q6RI45 1802 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 NINLQ9Y2I6 1382 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 A0A087WYN8 130 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 MEX3AA1L020 520 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 SH3PXD2BA1X283 911 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 RNF222A6NCQ9 220 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 METTL21EPA6NDL7 271 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 C17orf105B2RV13 164 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM178BH3BS89 294 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CHUKO15111 745 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms