RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SNX21Q969T3 373 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 SLCO4A1Q96BD0 722 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 RBM18Q96H35 190 aaKnown RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 C1orf147Q96MC9 270 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 C19orf43Q9BQ61 176 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF577Q9BSK1 485 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 FUNDC2Q9BWH2 189 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 ELL3Q9HB65 397 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 FAM212BQ9NTI7 297 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 PIGVQ9NUD9 493 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 EIF3KQ9UBQ5 218 aaKnown RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 NARFQ9UHQ1 456 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 ATG4BQ9Y4P1 393 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 SALL1Q9NSC2 1324 aa4.46□□□□□ -1.69
VPS26A-206ENST00000489794 ERI2A8K979 691 aaKnown RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 FOXI3A8MTJ6 420 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 HSF2BPO75031 334 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 DUSP11O75319 330 aaKnown RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 CALCAP01258 141 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 HCKP08631 526 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 HIST1H2AGP0C0S8 130 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 UGT1A6P19224 532 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 ELK3P41970 407 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 SSTP61278 116 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 HERV-K104P63124 156 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 ZFP36L1Q07352 338 aaKnown RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 COX10Q12887 443 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 C15orf32Q32M92 178 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 SLC10A5Q5PT55 438 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 NKAIN2Q5VXU1 208 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 ETFRF1Q6IPR1 90 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 RHBDD2Q6NTF9 364 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 GPR142Q7Z601 462 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 ITIH5Q86UX2 942 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 HIST1H2ACQ93077 130 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 CXorf58Q96LI9 332 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 GPR137Q96N19 417 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 LIME1Q9H400 295 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 CYP39A1Q9NYL5 469 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 SENP1Q9P0U3 644 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 ERVK-18Q9QC07 812 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 TRIM10Q9UDY6 481 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 TUBGCP4Q9UGJ1 667 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 DIMT1Q9UNQ2 313 aaKnown RBP4.46□□□□□ -1.7
VPS26A-206ENST00000489794 FBXO7Q9Y3I1 522 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 STYXL1Q9Y6J8 313 aa4.46□□□□□ -1.7
VPS26A-206ENST00000489794 TRIM64A6NGJ6 449 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 TRIM64BA6NI03 449 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 GPRIN2O60269 458 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 NME2P1O60361 137 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 KERAO60938 352 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 OLFM2O95897 454 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 FCGR3AP08637 254 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 FOLR2P14207 255 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 CASP9P55211 416 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 PPP1R8Q12972 351 aaKnown RBP4.45□□□□□ -1.7
VPS26A-206ENST00000489794 TMEM44Q2T9K0 475 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 DCAF12Q5T6F0 453 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 CDC42EP5Q6NZY7 148 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 ABRAXAS1Q6UWZ7 409 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 ASRGL1Q7L266 308 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 WDR49Q8IV35 697 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 CNTN4Q8IWV2 1026 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 PEX5LQ8IYB4 626 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 ARL10Q8N8L6 244 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 COLGALT1Q8NBJ5 622 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 PNPLA2Q96AD5 504 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 RAB39BQ96DA2 213 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 CAPNS2Q96L46 248 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 ATP6V0BQ99437 205 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 TEX13AQ9BXU3 409 aaPredicted RBP4.45□□□□□ -1.7
VPS26A-206ENST00000489794 CXXC4Q9H2H0 198 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 ZNF581Q9P0T4 197 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 APPL1Q9UKG1 709 aa4.45□□□□□ -1.7
VPS26A-206ENST00000489794 ISY1Q9ULR0 285 aaKnown RBP4.45□□□□□ -1.7
VPS26A-206ENST00000489794 TDRKHQ9Y2W6 561 aaKnown RBP4.45□□□□□ -1.7
VPS26A-206ENST00000489794 TEX48A0A1B0GUV7 120 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 BCL2L11O43521 198 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 RENP00797 406 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 SNRPCP09234 159 aaKnown RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 HSD17B1P14061 328 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 CALRP27797 417 aaKnown RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 MARCKSP29966 332 aaPredicted RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 ACADSBP45954 432 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 MTIF2P46199 727 aaKnown RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 NDST1P52848 882 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 LIMK2P53671 638 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 TRA2BP62995 288 aaKnown RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 GALK2Q01415 458 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 PCK2Q16822 640 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 ARL14Q8N4G2 192 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 RTL3Q8N8U3 475 aaKnown RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 LEMD2Q8NC56 503 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 ZNRF1Q8ND25 227 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 CHDHQ8NE62 594 aaPredicted RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 ACAT2Q9BWD1 397 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms