RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LPAR4Q99677 370 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 BARD1Q99728 777 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 C1orf50Q9BV19 199 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 BRINP2Q9C0B6 783 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 REXO4Q9GZR2 422 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 RNF32Q9H0A6 362 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 AIG1Q9NVV5 245 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 HEY2Q9UBP5 337 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 EXO1Q9UQ84 846 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 GPR45Q9Y5Y3 372 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 A0A088AWK7 358 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 A0A0A6YYD5 115 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 TRAV17A0A0B4J275 112 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 IGHV3-20A0A0C4DH32 117 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 PSMD12O00232 456 aaPredicted RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 ERI3O43414 337 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 TMPRSS11DO60235 418 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 SEC22BO75396 215 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 CDC123O75794 336 aaPredicted RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 AGFG2O95081 481 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 CBX6O95503 412 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 CELA2AP08217 269 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 BCKDHAP12694 445 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 RNH1P13489 461 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 ZNF10P21506 573 aaPredicted RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 CALB2P22676 271 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 ADSLP30566 484 aaPredicted RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.831e-6■■■■□ 21.9
SCAMP4-208ENST00000489554 TNFSF10P50591 281 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 RAB8AP61006 207 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 OLR1P78380 273 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 PHEXP78562 749 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 MRPL49Q13405 166 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 ELOAQ14241 798 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 INAQ16352 499 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 SPIN4Q56A73 249 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 SFT2D3Q587I9 215 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 IL23RQ5VWK5 629 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 NXNQ6DKJ4 435 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 OR4C11Q6IEV9 310 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 NOXRED1Q6NXP6 359 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 PAPD4Q6PIY7 484 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 QSOX2Q6ZRP7 698 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 ACAD11Q709F0 780 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 CPSF7Q8N684 471 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 FNDC5Q8NAU1 212 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 OR1N1Q8NGS0 311 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 M1APQ8TC57 530 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 NUDT8Q8WV74 236 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 RGMAQ96B86 450 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 EGLN2Q96KS0 407 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 TEX37Q96LM6 180 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 RBCK1Q9BYM8 510 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 NMUR2Q9GZQ4 415 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 DDX31Q9H8H2 851 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 PFDN4Q9NQP4 134 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 POLR3HQ9Y535 204 aaPredicted RBP9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 SCN3AQ9NY46 2000 aa9.88□□□□□ -0.83
SCAMP4-208ENST00000489554 RELNP78509 3460 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SETXQ7Z333 2677 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 RP1L1Q8IWN7 2480 aaPredicted RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 OR2W5A6NFC9 320 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ANKUB1A6NFN9 424 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 FCHO1O14526 889 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 UBDO15205 165 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 PRMT3O60678 531 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 GBAP04062 536 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 G6PDP11413 515 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ESRRAP11474 423 aaPredicted RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 GPX3P22352 226 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 HIST1H1TP22492 207 aaPredicted RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ATP5A1P25705 553 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 CERS1P27544 350 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 IL12AP29459 219 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ATP4BP51164 291 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 PLA2G16P53816 162 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 OR4D2P58180 307 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 IRX1P78414 480 aaPredicted RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ACSM2AQ08AH3 577 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ACSM2BQ68CK6 577 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 H3F3CQ6NXT2 135 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 CYP20A1Q6UW02 462 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 FAM180AQ6UWF9 173 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SPATA19Q7Z5L4 167 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 MTDHQ86UE4 582 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 FUNDC1Q8IVP5 155 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 RIMKLAQ8IXN7 391 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ZCCHC7Q8N3Z6 543 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ST6GALNAC3Q8NDV1 305 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SUN3Q8TAQ9 357 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ADAMTS18Q8TE60 1221 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 GRHL3Q8TE85 626 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 FAR1Q8WVX9 515 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 TSLPQ969D9 159 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ZNF354BQ96LW1 612 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 KCNC2Q96PR1 638 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 TBCDQ9BTW9 1192 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 CCDC106Q9BWC9 280 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 NPLQ9BXD5 320 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms