RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CXorf21Q9HAI6 301 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 DNAJC15Q9Y5T4 150 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 ZNF780BQ9Y6R6 833 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 TMEM200CA6NKL6 621 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ERAL1O75616 437 aaKnown RBP16.11■□□□□ 0.17
MDC1-206ENST00000489540 RASAL1O95294 804 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 NEFHP12036 1026 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 CSNK2A2P19784 350 aaPredicted RBP16.11■□□□□ 0.17
MDC1-206ENST00000489540 PRPH2P23942 346 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ALDH9A1P49189 494 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SSR4P51571 173 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 CASP8Q14790 479 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ZNF468Q5VIY5 522 aaPredicted RBP16.11■□□□□ 0.17
MDC1-206ENST00000489540 SLC25A25Q6KCM7 469 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 FAM180AQ6UWF9 173 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 GPALPP1Q8IXQ4 340 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SAMD14Q8IZD0 417 aaPredicted RBP16.11■□□□□ 0.17
MDC1-206ENST00000489540 BCORP1Q8N888 145 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 TMEM178AQ8NBL3 297 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 NUBPLQ8TB37 319 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 GRHL3Q8TE85 626 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 FAR1Q8WVX9 515 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ZBTB9Q96C00 473 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SIGLEC12Q96PQ1 595 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 RYDENQ9NUL5 291 aaKnown RBP16.11■□□□□ 0.17
MDC1-206ENST00000489540 FIS1Q9Y3D6 152 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 OR6C76A6NM76 312 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SEC22BO75396 215 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 NEURL1O76050 574 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SNUPNO95149 360 aaKnown RBP16.11■□□□□ 0.17
MDC1-206ENST00000489540 SERPINE1P05121 402 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SP1P08047 785 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 IL3P08700 152 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 DHRS4L1P0CG22 281 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ERVK-8P63133 956 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ZNF763Q0D2J5 394 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 MPP2Q14168 576 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 UGT3A2Q3SY77 523 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SH2D4BQ5SQS7 431 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 C6orf163Q5TEZ5 329 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 GALNT12Q8IXK2 581 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 MMP21Q8N119 569 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 DNAJB8Q8NHS0 232 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 TMEM125Q96AQ2 219 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 KLHL29Q96CT2 875 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 SCMH1Q96GD3 660 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 CCT7Q99832 543 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 EBPLQ9BY08 206 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 CLMPQ9H6B4 373 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 LRTM1Q9HBL6 345 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 C1orf109Q9NX04 203 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 EHD3Q9NZN3 535 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 HEY2Q9UBP5 337 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 UTS2RQ9UKP6 389 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 ERVK-19Q9WJR5 959 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 NTNG1Q9Y2I2 539 aa16.11■□□□□ 0.17
MDC1-206ENST00000489540 WDR91A4D1P6 747 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 TMEM114B3SHH9 223 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 TCP11X1B4DZS4 312 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 HRKO00198 91 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 WWP2O00308 870 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 SLC25A12O75746 678 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 OR2J2O76002 312 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 CRYABP02511 175 aaKnown RBP16.1■□□□□ 0.17
MDC1-206ENST00000489540 ATP1B1P05026 303 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 LINC00032P0C843 101 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 NT5EP21589 574 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 FEN1P39748 380 aaKnown RBP16.1■□□□□ 0.17
MDC1-206ENST00000489540 ST13P50502 369 aaKnown RBP16.1■□□□□ 0.17
MDC1-206ENST00000489540 HK2P52789 917 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 KIAA0040Q15053 153 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 CHI3L2Q15782 390 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 MPEG1Q2M385 716 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 NOXRED1Q6NXP6 359 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 RNF111Q6ZNA4 994 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 Q6ZSR9 355 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 SLC29A4Q7RTT9 530 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 TWIST2Q8WVJ9 160 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 PKNOX2Q96KN3 472 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 TUBB1Q9H4B7 451 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 LIN28AQ9H9Z2 209 aaKnown RBP16.1■□□□□ 0.17
MDC1-206ENST00000489540 TMBIM4Q9HC24 238 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 PFDN4Q9NQP4 134 aa16.1■□□□□ 0.17
MDC1-206ENST00000489540 A0A1W2PS29 197 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 A8MVJ9 347 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 DDCP20711 480 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 GRK2P25098 689 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 ARRB2P32121 409 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 SLC18A1P54219 525 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 SLC37A1P57057 533 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 C2orf80Q0P641 193 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 FUT7Q11130 342 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 MAP4K2Q12851 820 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 NR6A1Q15406 480 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 MAPKAPK3Q16644 382 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 ZNF750Q32MQ0 723 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 PIGGQ5H8A4 983 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 C9orf40Q8IXQ3 194 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 DDIASQ8IXT1 998 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 LRRC25Q8N386 305 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms