RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF382Q96SR6 550 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 BRINP2Q9C0B6 783 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 TRIM45Q9H8W5 580 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 MID1IP1Q9NPA3 183 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 GRID1Q9ULK0 1009 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ERVK-19Q9WJR5 959 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ASB4Q9Y574 426 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 HIVEP3Q5T1R4 2406 aa8.46□□□□□ -1.05
HDAC6-232ENST00000489053 C2orf92A0A1B0GVN3 265 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 C1orf226A1L170 272 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 FAM166BA8MTA8 275 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 G3V3Y1 287 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 H3BQF6 201 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 TP53I11O14683 189 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 DLX3O60479 287 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 CHEK2O96017 543 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 TPOP07202 933 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 KRT4P19013 534 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 CSNK2A2P19784 350 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 IMPDH1P20839 514 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 TNFRSF8P28908 595 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 CA7P43166 264 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 PRKAA2P54646 552 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 PPIAP62937 165 aaKnown RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 IGLV3-21P80748 117 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 SPIN4Q56A73 249 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 ARHGAP11AQ6P4F7 1023 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 BNC2Q6ZN30 1099 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 MDGA2Q7Z553 956 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 SPPL2CQ8IUH8 684 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 SAMD14Q8IZD0 417 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 METTL4Q8N3J2 472 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 SLC15A4Q8N697 577 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 C1orf52Q8N6N3 182 aaKnown RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF321PQ8N8H1 164 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 GOLM1Q8NBJ4 401 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 NUBPLQ8TB37 319 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 RDH11Q8TC12 318 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 DOK4Q8TEW6 326 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 RELTQ969Z4 430 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 JSRP1Q96MG2 331 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM237Q96Q45 408 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 HBEGFQ99075 208 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 FAM173AQ9BQD7 235 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 C1QTNF3Q9BXJ4 246 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 LDAHQ9H6V9 325 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 L2HGDHQ9H9P8 463 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 ZBTB26Q9HCK0 441 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 FARSBQ9NSD9 589 aaKnown RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 RYDENQ9NUL5 291 aaKnown RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 BCAP29Q9UHQ4 241 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF223Q9UK11 482 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 BOKQ9UMX3 212 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-232ENST00000489053 ENTPD4Q9Y227 616 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 CFL2Q9Y281 166 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 SHANK1Q9Y566 2161 aa8.46□□□□□ -1.06
HDAC6-232ENST00000489053 PRSS44E7EML9 344 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 HS6ST1O60243 411 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PCDH7O60245 1069 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PRKNO60260 465 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PDE9AO76083 593 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 CPMP14384 443 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 CPA3P15088 417 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PORP16435 677 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 GCAP28676 217 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 GALNSP34059 522 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PTGS2P35354 604 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 TRA2BP62995 288 aaKnown RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 BTKQ06187 659 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 HEPACAMQ14CZ8 416 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 C3AR1Q16581 482 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 MPEG1Q2M385 716 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 SPRED3Q2MJR0 410 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 ERCC6LQ2NKX8 1250 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF750Q32MQ0 723 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 UNC50Q53HI1 259 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PIGGQ5H8A4 983 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 SLC22A10Q63ZE4 541 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 ZYG11AQ6WRX3 759 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 MRGPRGQ86SM5 289 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 C9orf40Q8IXQ3 194 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 C4orf33Q8N1A6 199 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 LRRC25Q8N386 305 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 VWA5B2Q8N398 1253 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 LIX1Q8N485 282 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 LRRN4CLQ8ND94 238 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 OR7G1Q8NGA0 311 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 OR5M3Q8NGP4 307 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 EPS8L3Q8TE67 593 aaKnown RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF721Q8TF20 911 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 SPACA9Q96E40 222 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-232ENST00000489053 L3HYPDHQ96EM0 354 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 BBS4Q96RK4 519 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 TXLNGYQ9BZA5 131 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 WWTR1Q9GZV5 400 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 DEFB127Q9H1M4 99 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 TEX10Q9NXF1 929 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms