RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 FOXO1Q12778 655 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 IFT88Q13099 833 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 CCNYL2Q5T2Q4 361 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 NDUFAF5Q5TEU4 345 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM219BQ5XKK7 198 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC22A10Q63ZE4 541 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 PAOXQ6QHF9 649 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 LYPD8Q6UX82 237 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 RGS9BPQ6ZS82 235 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC29A4Q7RTT9 530 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC22A16Q86VW1 577 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 EID3Q8N140 333 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 MARVELD2Q8N4S9 558 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 TMEM251Q8N6I4 163 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC22A8Q8TCC7 542 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 PHF10Q8WUB8 498 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SDCCAG3Q96C92 435 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 PELOQ9BRX2 385 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 MRPL1Q9BYD6 325 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 ELOVL6Q9H5J4 265 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 ZDHHC11Q9H8X9 412 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 IL1RL2Q9HB29 575 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 TEX10Q9NXF1 929 aaPredicted RBP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 TUBA8Q9NY65 449 aaPredicted RBP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 AHSPQ9NZD4 102 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 LRBAP50851 2863 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 ATP6AP2A0A1C7CYW4 349 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 A8MT66 165 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 ATP6AP2O75787 350 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 OTCP00480 354 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 PDYNP01213 254 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 CLPSP04118 112 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 RPS17P08708 135 aaKnown RBP11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 CELA3AP09093 270 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 PIK3R1P27986 724 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 GCAP28676 217 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SSTR4P31391 388 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SPRED3Q2MJR0 410 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 GXYLT1Q4G148 440 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 EMC4Q5J8M3 183 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 LGSNQ5TDP6 509 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 OR52E8Q6IFG1 317 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 LETMD1Q6P1Q0 360 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 TMEM64Q6YI46 380 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 IFT20Q8IY31 132 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC15A4Q8N697 577 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM13CQ8NE31 585 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 OR4K14Q8NGD5 310 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 OR5M9Q8NGP3 310 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 OR5M3Q8NGP4 307 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 KIF18AQ8NI77 898 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 TRPC4APQ8TEL6 797 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 CA5BP1Q8WTZ4 195 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SPACA9Q96E40 222 aaPredicted RBP11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 WWTR1Q9GZV5 400 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 CXorf21Q9HAI6 301 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SH2D2AQ9NP31 389 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 COQ3Q9NZJ6 369 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 TNFRSF10DQ9UBN6 386 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC12A4Q9UP95 1085 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 LIPGQ9Y5X9 500 aa11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.01□□□□□ -0.65
CCHCR1-215ENST00000488920 LRATO95237 230 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 FBXO45P0C2W1 286 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM153BP0C7A2 387 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 SERPINB3P29508 390 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 GALNSP34059 522 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 PTGER4P35408 488 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 HSD17B3P37058 310 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 XKP51811 444 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 MAPK12P53778 367 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 PMPCAQ10713 525 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC10A1Q14973 349 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 EBPQ15125 230 aaKnown RBP11□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM153CQ494X1 144 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 GGTA1PQ4G0N0 100 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 C10orf62Q5T681 223 aaPredicted RBP11□□□□□ -0.65
CCHCR1-215ENST00000488920 PRAMEF20Q5VT98 475 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 TMEM211Q6ICI0 200 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 TIFABQ6ZNK6 161 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 TRILQ7L0X0 811 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
CCHCR1-215ENST00000488920 PAGE2Q7Z2X7 111 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 COMMD6Q7Z4G1 85 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 MMP21Q8N119 569 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 METTL4Q8N3J2 472 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM109AQ8N4B1 249 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 CEP112Q8N8E3 955 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 OR10G3Q8NGC4 313 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 PAQR8Q8TEZ7 354 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 SELENOMQ8WWX9 145 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 SMC6Q96SB8 1091 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 HBEGFQ99075 208 aa11□□□□□ -0.65
CCHCR1-215ENST00000488920 TP63Q9H3D4 680 aaPredicted RBP11□□□□□ -0.65
CCHCR1-215ENST00000488920 PNPLA3Q9NST1 481 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms