RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FAM110BQ8TC76 370 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 CENPNQ96H22 339 aaPredicted RBP18.25■□□□□ 0.51
CCM2-216ENST00000488727 CCDC115Q96NT0 180 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 DPH2Q9BQC3 489 aaPredicted RBP18.25■□□□□ 0.51
CCM2-216ENST00000488727 YIPF3Q9GZM5 350 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 BRF2Q9HAW0 419 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 ZNF304Q9HCX3 659 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 SEC22BO75396 215 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 RDH16O75452 317 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 ONECUT2O95948 504 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 CCNYL3P0C7X3 344 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 PRPS2P11908 318 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 MAT1AQ00266 395 aaKnown RBP18.24■□□□□ 0.51
CCM2-216ENST00000488727 SYT16Q17RD7 645 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 TRIM40Q6P9F5 258 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 GTF2H4Q92759 462 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 QRFPRQ96P65 431 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 C9orf16Q9BUW7 83 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 SORBS1Q9BX66 1292 aaKnown RBP18.24■□□□□ 0.51
CCM2-216ENST00000488727 ZNF717Q9BY31 904 aaPredicted RBP18.24■□□□□ 0.51
CCM2-216ENST00000488727 MRPS26Q9BYN8 205 aaKnown RBP18.24■□□□□ 0.51
CCM2-216ENST00000488727 PRDM7Q9NQW5 492 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 TMED5Q9Y3A6 229 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 ACACAQ13085 2346 aa18.24■□□□□ 0.51
CCM2-216ENST00000488727 LOC101059948A0A1B0GTJ6 334 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 PLPP1O14494 284 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 PABPC4LP0CB38 370 aaKnown RBP18.23■□□□□ 0.51
CCM2-216ENST00000488727 BCKDHAP12694 445 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 AGXTP21549 392 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 AVPR1BP47901 424 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 OR4D2P58180 307 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 BTN3A2P78410 334 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 CSTF3Q12996 717 aaKnown RBP18.23■□□□□ 0.51
CCM2-216ENST00000488727 CLN3Q13286 438 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 ATP6AP1Q15904 470 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 ZNF793Q6ZN11 406 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 EPHX4Q8IUS5 362 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 OR5T3Q8NGG3 340 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 CT55Q8WUE5 264 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 KCNC2Q96PR1 638 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 RPF2Q9H7B2 306 aaKnown RBP18.23■□□□□ 0.51
CCM2-216ENST00000488727 NDUFA13Q9P0J0 144 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 CDC14AQ9UNH5 594 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 H0YIG0 161 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 SOCS2O14508 198 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 TERTO14746 1132 aaKnown RBP18.23■□□□□ 0.51
CCM2-216ENST00000488727 CNOT3O75175 753 aaKnown RBP18.23■□□□□ 0.51
CCM2-216ENST00000488727 PGRP06401 933 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 HSD3B1P14060 373 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 NCK1P16333 377 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 HSD3B2P26439 372 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 CERS1P27544 350 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 MAPK1P28482 360 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 HNRNPFP52597 415 aaKnown RBP18.23■□□□□ 0.51
CCM2-216ENST00000488727 CLDN8P56748 225 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 OLR1P78380 273 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 DSG2Q14126 1118 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 SELPLGQ14242 412 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 MAPKAPK3Q16644 382 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 FAM174BQ3ZCQ3 159 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 ARHGAP40Q5TG30 622 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 IL22RA1Q8N6P7 574 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 ZNF248Q8NDW4 579 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 COL26A1Q96A83 441 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 FCRL1Q96LA6 429 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 NSMCE2Q96MF7 247 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 ANKRD60Q9BZ19 345 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 HCN3Q9P1Z3 774 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 CTSFQ9UBX1 484 aa18.23■□□□□ 0.51
CCM2-216ENST00000488727 CROCCQ5TZA2 2017 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 ZFHX4Q86UP3 3567 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 TRBV5-3A0A0A0MS03 114 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SMIM31A0A1B0GVY4 71 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SEMA3DO95025 777 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 GGT1P19440 569 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 TCN2P20062 427 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 FBLP22087 321 aaKnown RBP18.22■□□□□ 0.51
CCM2-216ENST00000488727 F8A1P23610 371 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 BSGP35613 385 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 FOXL2P58012 376 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 MTPNP58546 118 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SRSF6Q13247 344 aaKnown RBP18.22■□□□□ 0.51
CCM2-216ENST00000488727 APOFQ13790 326 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 NHSL2Q5HYW2 709 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SPANXN4Q5MJ08 99 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 GLYATQ6IB77 296 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 TMEM151BQ8IW70 566 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SRFBP1Q8NEF9 429 aaKnown RBP18.22■□□□□ 0.51
CCM2-216ENST00000488727 TNIP2Q8NFZ5 429 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 KCNE4Q8WWG9 221 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 RGMAQ96B86 450 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SH3GL1Q99961 368 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 TBCDQ9BTW9 1192 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 IFT80Q9P2H3 777 aaPredicted RBP18.22■□□□□ 0.51
CCM2-216ENST00000488727 PCDHGB4Q9UN71 923 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 USP22Q9UPT9 525 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 MAN2B2Q9Y2E5 1009 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 MAP4K5Q9Y4K4 846 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 PCDHGB5Q9Y5G0 923 aa18.22■□□□□ 0.51
CCM2-216ENST00000488727 SCN2AQ99250 2005 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms