RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 SETXQ7Z333 2677 aaKnown RBP21.99■■□□□ 1.11
RHBDD3-205ENST00000488106 FREM3P0C091 2139 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 DNAJC13O75165 2243 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 ZNF407Q9C0G0 2248 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 C1orf226A1L170 272 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 CBX6O95503 412 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 SLC35E2P0CK97 266 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 ZNF267Q14586 743 aaPredicted RBP21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 MAPKAPK3Q16644 382 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 SPRED3Q2MJR0 410 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 EIF2S3LQ2VIR3 472 aaKnown RBP21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 ZNF750Q32MQ0 723 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 ZCCHC23Q6ZST2 131 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 ZNF227Q86WZ6 799 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 CYP4Z2PQ8N1L4 340 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 PRR7Q8TB68 274 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 KLHL29Q96CT2 875 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 FAIM2Q9BWQ8 316 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 YARS2Q9Y2Z4 477 aaKnown RBP21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 MYO7BQ6PIF6 2116 aa21.98■■□□□ 1.11
RHBDD3-205ENST00000488106 TYROBPO43914 113 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 ERAL1O75616 437 aaKnown RBP21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 IGKV3-11P04433 115 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 CHRNGP07510 517 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 SP1P08047 785 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 IL3P08700 152 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 UROSP10746 265 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 TIA1P31483 386 aaKnown RBP eCLIP21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 XKP51811 444 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 SLC25A25Q6KCM7 469 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 SLC48A1Q6P1K1 146 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 C9orf40Q8IXQ3 194 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 ST6GALNAC3Q8NDV1 305 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 CDC26Q8NHZ8 85 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 ASB15Q8WXK1 588 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 NR4A3Q92570 626 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 TMEM125Q96AQ2 219 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 RASL10BQ96S79 203 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 SLX1AQ9BQ83 275 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 TRMOQ9BU70 441 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 ERVK-11Q9UQG0 969 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 PCDHGB6Q9Y5F9 930 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 PTGDR2Q9Y5Y4 395 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 NCKAP5O14513 1909 aa21.97■■□□□ 1.11
RHBDD3-205ENST00000488106 SERTM1A2A2V5 107 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 AZIN1O14977 448 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 NME2P1O60361 137 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 CRYABP02511 175 aaKnown RBP21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 EDN3P14138 238 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 CPMP14384 443 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 NME2P22392 152 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 SOX3P41225 446 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 TRA2BP62995 288 aaKnown RBP21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 C6orf163Q5TEZ5 329 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 FAM180BQ6P0A1 224 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 RNF111Q6ZNA4 994 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 OR8K3Q8NH51 312 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 GAL3ST4Q96RP7 486 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 TRIM45Q9H8W5 580 aaPredicted RBP21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 HEY2Q9UBP5 337 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 CES1P1Q9UKY3 287 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 DLGAP4Q9Y2H0 992 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 ICE1Q9Y2F5 2266 aa21.96■■□□□ 1.11
RHBDD3-205ENST00000488106 USP9YO00507 2555 aaPredicted RBP21.95■■□□□ 1.11
RHBDD3-205ENST00000488106 GOLGA6L10A6NI86 522 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 A8MVJ9 347 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 CDK2AP1O14519 115 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 ERLIN1O75477 346 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 OR6B1O95007 311 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 NT5EP21589 574 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 PTGER1P34995 402 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 FEN1P39748 380 aaKnown RBP21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 SRSF1Q07955 248 aaKnown RBP eCLIP21.95■■□□□ 1.16e-10■■■■■ 30.4
RHBDD3-205ENST00000488106 ZNF324BQ6AW86 544 aaPredicted RBP21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 GALNT12Q8IXK2 581 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 FAM98AQ8NCA5 519 aaKnown RBP21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 OR5L2Q8NGL0 311 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 AGR3Q8TD06 166 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 CXorf21Q9HAI6 301 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 RRAGDQ9NQL2 400 aaPredicted RBP21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 HPF1Q9NWY4 346 aa21.95■■□□□ 1.1
RHBDD3-205ENST00000488106 TMEM233B4DJY2 109 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 NPHS1O60500 1241 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 ANXA4P09525 319 aaPredicted RBP21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 CT62P0C5K7 136 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 PORP16435 677 aaPredicted RBP21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 MST1P26927 711 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 SSTR4P31391 388 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 GALNSP34059 522 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 TDGF1P3P51864 188 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 FHL5Q5TD97 284 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 KANK2Q63ZY3 851 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 IL20RBQ6UXL0 311 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 SLC29A4Q7RTT9 530 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 TRIM46Q7Z4K8 759 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 EXOC3L1Q86VI1 746 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 FAM26EQ8N5C1 309 aa21.94■■□□□ 1.1
RHBDD3-205ENST00000488106 C16orf78Q8WTQ4 265 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms