RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 PSD3Q9NYI0 1048 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 SPRR3Q9UBC9 169 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ERVK-19Q9WJR5 959 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 HCFC1P51610 2035 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 HIVEP1P15822 2718 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 A0A096LPK6 155 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 A0A0G2JNJ9 132 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 CCDC189A1A4V9 331 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 FIGNL2A6NMB9 653 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 FOXO6A8MYZ6 492 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 PGRMC2O15173 223 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 HCN1O60741 890 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 KLHL2O95198 593 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 SIX3O95343 332 aaPredicted RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 CLPSP04118 112 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 ADH7P40394 386 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 BUD31P41223 144 aaPredicted RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 ZFP36L2P47974 494 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 PIK3CGP48736 1102 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 SLC37A1P57057 533 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 CUL3Q13618 768 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 SPRED3Q2MJR0 410 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 UBAP2Q5T6F2 1119 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 PRAMEF20Q5VT98 475 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 CYP20A1Q6UW02 462 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 SYT10Q6XYQ8 523 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 GOLGA7Q7Z5G4 137 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 PLD6Q8N2A8 252 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 OR10G3Q8NGC4 313 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 RIT1Q92963 219 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 REPS1Q96D71 796 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 ART5Q96L15 291 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 WWTR1Q9GZV5 400 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 EXO5Q9H790 373 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 ZFP64Q9NPA5 681 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 ZDHHC18Q9NUE0 388 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 LYARQ9NX58 379 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 CPSF2Q9P2I0 782 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 Q9UFV3 132 aa11.23□□□□□ -0.61
VPS16-208ENST00000487461 CNOT11Q9UKZ1 510 aaKnown RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 CHCHD2Q9Y6H1 151 aaPredicted RBP11.23□□□□□ -0.61
VPS16-208ENST00000487461 A0A1W2PS29 197 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 FOXE1O00358 373 aaPredicted RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 OR7A17O14581 309 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 OR10H2O60403 315 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 UGDHO60701 494 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 WDR1O75083 606 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 LRATO95237 230 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 AIFM1O95831 613 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 GBAP04062 536 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 ALDOAP04075 364 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 FBXO45P0C2W1 286 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 SLC35E2P0CK97 266 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 NR2F6P10588 404 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 SERPINB3P29508 390 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 TYK2P29597 1187 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 GALNSP34059 522 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 DLX5P56178 289 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 ETF1P62495 437 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 KCNJ2P63252 427 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 PHEXP78562 749 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 EBPQ15125 230 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 UAP1Q16222 522 aaPredicted RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 C1orf185Q5T7R7 199 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 TMEM64Q6YI46 380 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 RNF111Q6ZNA4 994 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 SLC29A4Q7RTT9 530 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 ZNF572Q7Z3I7 529 aaPredicted RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 DND1Q8IYX4 353 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 LRRC25Q8N386 305 aaPredicted RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 FBXW8Q8N3Y1 598 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 NINQ8N4C6 2090 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 ZNF441Q8N8Z8 693 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 FAM13CQ8NE31 585 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 SARAFQ96BY9 339 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 CDK15Q96Q40 435 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 GAL3ST4Q96RP7 486 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 PELOQ9BRX2 385 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 ZNF703Q9H7S9 590 aaPredicted RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 NOL11Q9H8H0 719 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 ACKR4Q9NPB9 350 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS16-208ENST00000487461 ZNF358Q9NW07 568 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 CNIH4Q9P003 139 aa11.22□□□□□ -0.61
VPS16-208ENST00000487461 BOKQ9UMX3 212 aaPredicted RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 TNPO3Q9Y5L0 923 aaKnown RBP11.22□□□□□ -0.61
VPS16-208ENST00000487461 C2CD3Q4AC94 2353 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 OR6C76A6NM76 312 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 CLDN9O95484 217 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 SSTR4P31391 388 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 TRPC1P48995 793 aa11.21□□□□□ -0.61
VPS16-208ENST00000487461 TBL3Q12788 808 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms