RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 RIT1Q92963 219 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 PPWD1Q96BP3 646 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 PPCDCQ96CD2 204 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 COQ8BQ96D53 544 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 THOC1Q96FV9 657 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 PRPF18Q99633 342 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 DPY30Q9C005 99 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 MMP25Q9NPA2 562 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 SH3BP4Q9P0V3 963 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 DMXL2Q8TDJ6 3036 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 C17orf105B2RV13 164 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 DYRK3O43781 588 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 CEACAM4O75871 244 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 MPIP34949 423 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 FRKP42685 505 aaPredicted RBP18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 MAP4K2Q12851 820 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 BTBD16Q32M84 506 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 PDCD4Q53EL6 469 aaKnown RBP18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF385BQ569K4 471 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 TMEM198Q66K66 360 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 DGAT2L6Q6ZPD8 337 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 CAMKMTQ7Z624 323 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 CCDC116Q8IYX3 515 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 GALNT16Q8N428 558 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 KRTCAP2Q8N6L1 136 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 ELP5Q8TE02 316 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 ART5Q96L15 291 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 CXorf21Q9HAI6 301 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 SDR39U1Q9NRG7 319 aaPredicted RBP18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 ANKRD11Q6UB99 2663 aaPredicted RBP18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 CELSR3Q9NYQ7 3312 aa18.08■□□□□ 0.48
PCOLCE-208ENST00000487172 A0A0G2JND7 137 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 GMNCA6NCL1 334 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 MASP2O00187 686 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 KLHL41O60662 606 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 CLNS1AP54105 237 aaKnown RBP18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 GNGT1P63211 74 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 RHDQ02161 417 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 DUSP2Q05923 314 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 RPS6KA2Q15349 733 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 MPEG1Q2M385 716 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 DPY19L1Q2PZI1 675 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 PRICKLE4Q2TBC4 344 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 CPTPQ5TA50 214 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 METTL21CQ5VZV1 264 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 JMJD6Q6NYC1 403 aaPredicted RBP18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 FAM180BQ6P0A1 224 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 APCDD1LQ8NCL9 501 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 OR1N1Q8NGS0 311 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 SUN3Q8TAQ9 357 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF675Q8TD23 568 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 TESCQ96BS2 214 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 VMP1Q96GC9 406 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 FBXL20Q96IG2 436 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 BBS4Q96RK4 519 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 TMEM120AQ9BXJ8 343 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 SEMA4CQ9C0C4 833 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 BHLHE41Q9C0J9 482 aaPredicted RBP18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 LHPPQ9H008 270 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 ATAD3AQ9NVI7 634 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 ZIM2Q9NZV7 527 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 MED13Q9UHV7 2174 aa18.07■□□□□ 0.48
PCOLCE-208ENST00000487172 E9PBE3 544 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 PDPK1O15530 556 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 SLITRK5O94991 958 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 DDAH2O95865 285 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 IGKV3-11P04433 115 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 NT5EP21589 574 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 NTSP30990 170 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 CCL11P51671 97 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 CLCN2P51788 898 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 ARFIP2P53365 341 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 SEC24CP53992 1094 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 UFM1P61960 85 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 SRSF11Q05519 484 aaKnown RBP18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 MGAT2Q10469 447 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 CHAF1BQ13112 559 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 MLC1Q15049 377 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 ANKRD26P1Q6NSI1 321 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 H3F3CQ6NXT2 135 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 GALNT12Q8IXK2 581 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 GLB1L3Q8NCI6 653 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 OR7A2PQ8NGA2 310 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 OR8J2Q8NGG1 315 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 SLC2A12Q8TD20 617 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF721Q8TF20 911 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 EXTL1Q92935 676 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 CTHRC1Q96CG8 243 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 SENP5Q96HI0 755 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 RILPQ96NA2 401 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 GLIPR2Q9H4G4 154 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 CLMPQ9H6B4 373 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 ACSS1Q9NUB1 689 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 MAT2BQ9NZL9 334 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF639Q9UID6 485 aa18.06■□□□□ 0.48
PCOLCE-208ENST00000487172 IFI6P09912 130 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 CT62P0C5K7 136 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 LAMP1P11279 417 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 ATP4BP51164 291 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms