RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 MGAT4BQ9UQ53 548 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 NUMA1Q14980 2115 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 PRAMEF27A3QJZ7 478 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 EFCAB10A6NFE3 127 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 PRR19A6NJB7 356 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 FAAHO00519 579 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 SOX1O00570 391 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 COQ9O75208 318 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 SERPINB7O75635 380 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 PTHP01270 115 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 CEACAM5P06731 702 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 H1F0P07305 194 aaKnown RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 OR12D1P0DN82 309 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 OSMP13725 252 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 BCL6P41182 706 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 RPS21P63220 83 aaKnown RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 SEC23BQ15437 767 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 SYPL1Q16563 259 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 DCST1Q5T197 706 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 NIPAL1Q6NVV3 410 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 PTCHD4Q6ZW05 846 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 ZNF513Q8N8E2 541 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 FAM46DQ8NEK8 389 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 OR4D11Q8NGI4 311 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 VANGL1Q8TAA9 524 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 TREX2Q9BQ50 279 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 ZBTB20Q9HC78 741 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 MRPS30Q9NP92 439 aaKnown RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 DZANK1Q9NVP4 752 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 CLN6Q9NWW5 311 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 REV1Q9UBZ9 1251 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 SEC14L3Q9UDX4 400 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 ACAD8Q9UKU7 415 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC17A4Q9Y2C5 497 aa17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 GPC6Q9Y625 555 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-207ENST00000486828 CKAP5Q14008 2032 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 FUOMA2VDF0 154 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 KCNJ13O60928 360 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 CD72P21854 359 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 GPC1P35052 558 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 SGCGQ13326 291 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 KRT33BQ14525 404 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 ZNF776Q68DI1 518 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 DEF8Q6ZN54 512 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 USP43Q70EL4 1123 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 ZNF367Q7RTV3 350 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 OR52E1Q8NGJ3 308 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 CDCA4Q9BXL8 241 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 MROQ9BYG7 248 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 KLHL31Q9H511 634 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 SEMA3GQ9NS98 782 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 PLEKHM1Q9Y4G2 1056 aa17.01■□□□□ 0.31
PDLIM7-207ENST00000486828 MAN2B1O00754 1011 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 POU1F1P28069 291 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 NTSP30990 170 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 NCBP2P52298 156 aaKnown RBP eCLIP17■□□□□ 0.312e-6■□□□□ 8.3
PDLIM7-207ENST00000486828 SMIM11AP58511 58 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 OLR1P78380 273 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 HYAL2Q12891 473 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 ILKQ13418 452 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC9A5Q14940 896 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 SZRD1Q7Z422 152 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 RBM45Q8IUH3 476 aaKnown RBP17■□□□□ 0.31
PDLIM7-207ENST00000486828 OR5D16Q8NGK9 328 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 MCFD2Q8NI22 146 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 XAGE5Q8WWM1 108 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 DSN1Q9H410 356 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 MVB12BQ9H7P6 319 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC6A20Q9NP91 592 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 ZCCHC3Q9NUD5 404 aaKnown RBP17■□□□□ 0.31
PDLIM7-207ENST00000486828 DAPK2Q9UIK4 370 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 HEATR5BQ9P2D3 2071 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 OR52A4PA6NMU1 304 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 RFXAPO00287 272 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 PRICKLE3O43900 615 aaPredicted RBP17■□□□□ 0.31
PDLIM7-207ENST00000486828 OR10H3O60404 316 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 CNOT3O75175 753 aaKnown RBP17■□□□□ 0.31
PDLIM7-207ENST00000486828 NR2F1P10589 423 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 PPP2R1BP30154 601 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 MAGEA8P43361 318 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 KHKP50053 298 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 BCAP31P51572 246 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 ABATP80404 500 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 OXA1LQ15070 435 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 TRIM16LQ309B1 348 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 LEXMQ3ZCV2 418 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 ARMCX4Q5H9R4 360 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 TMEM64Q6YI46 380 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 LACC1Q8IV20 430 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 FAM20CQ8IXL6 584 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 TBC1D19Q8N5T2 526 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 MS4A6EQ96DS6 147 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 DACH2Q96NX9 599 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 KXD1Q9BQD3 176 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 WFDC6Q9BQY6 131 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 FUZQ9BT04 418 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 TRPC4Q9UBN4 977 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 NDOR1Q9UHB4 597 aa17■□□□□ 0.31
PDLIM7-207ENST00000486828 CCDC88CQ9P219 2028 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms