RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PAPD4Q6PIY7 484 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 ZYG11AQ6WRX3 759 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 FRMD7Q6ZUT3 714 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 C4orf33Q8N1A6 199 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 METTL4Q8N3J2 472 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 FAM47BQ8NA70 645 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 GALNT11Q8NCW6 608 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 MDS2Q8NDY4 140 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 CATSPER1Q8NEC5 780 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 B3GNT7Q8NFL0 401 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 OR2T11Q8NH01 316 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 OR8K3Q8NH51 312 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 DNAJB14Q8TBM8 379 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 BRIX1Q8TDN6 353 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 AGAP11Q8TF27 550 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 CHTF18Q8WVB6 975 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SREK1Q8WXA9 508 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 METTL21AQ8WXB1 218 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 REPS1Q96D71 796 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 CCDC126Q96EE4 140 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SCMH1Q96GD3 660 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 METTL2AQ96IZ6 378 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 THOC3Q96J01 351 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 PTCHD1Q96NR3 888 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 TAAR6Q96RI8 345 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 MTERF1Q99551 399 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 SERPINI1Q99574 410 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 LPAR4Q99677 370 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 MECRQ9BV79 373 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SLC29A3Q9BZD2 475 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 C20orf27Q9GZN8 174 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 OR51B5Q9H339 312 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 TUBB1Q9H4B7 451 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 ACTR8Q9H981 624 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SSU72Q9NP77 194 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 SEMA4BQ9NPR2 832 aaPredicted RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 TEX10Q9NXF1 929 aaPredicted RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 MS4A12Q9NXJ0 267 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 C19orf25Q9UFG5 118 aaPredicted RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 GIMAP2Q9UG22 337 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 TBK1Q9UHD2 729 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 PLAAQ9Y263 795 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 ATG4BQ9Y4P1 393 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 FREM1Q5H8C1 2179 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TACC2O95359 2948 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 APCP25054 2843 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ASPDHA6ND91 283 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 WIPF3A6NGB9 483 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 A6NL46 340 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 SMIM23A6NLE4 172 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 C17orf51A8MQB3 221 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TMEM233B4DJY2 109 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MANBAO00462 879 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CLDN4O14493 209 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 FGF17O60258 216 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 NME6O75414 186 aaPredicted RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 NEURL1O76050 574 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 OR4F21O95013 312 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 WISP1O95388 367 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CBX6O95503 412 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MLYCDO95822 493 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 WDPCPO95876 746 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 PDYNP01213 254 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 C1QCP02747 245 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 GBAP04062 536 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ALPPP05187 535 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 SERPIND1P05546 499 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ENO1P06733 434 aaKnown RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 CT62P0C5K7 136 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TAC1P20366 129 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 S1PR1P21453 382 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ITGA3P26006 1051 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TDGF1P3P51864 188 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CCNG1P51959 295 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 SLC18A1P54219 525 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MLLT10P55197 1068 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MLF1P58340 268 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 PMP22Q01453 160 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TNFRSF17Q02223 184 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ID2Q02363 134 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TGM3Q08188 693 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MGAT2Q10469 447 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CSTF3Q12996 717 aaKnown RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 SLAMF1Q13291 335 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ELAVL1Q15717 326 aaKnown RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 INPP5JQ15735 1006 aaPredicted RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 AP5B1Q2VPB7 878 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MINDY4Q4G0A6 757 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ACER2Q5QJU3 275 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 BEND6Q5SZJ8 279 aaPredicted RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 C18orf63Q68DL7 685 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 FAM180BQ6P0A1 224 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MILR1Q7Z6M3 343 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 GPR180Q86V85 440 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CD163Q86VB7 1156 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 GBP7Q8N8V2 638 aaPredicted RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 TEX19Q8NA77 164 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 MORN4Q8NDC4 146 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ZNF721Q8TF20 911 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms