RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LIX1Q8N485 282 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 RNF175Q8N4F7 328 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 SLC15A4Q8N697 577 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 TMEM251Q8N6I4 163 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 FAM13CQ8NE31 585 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 OR5M9Q8NGP3 310 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 PPWD1Q96BP3 646 aaKnown RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 JSRP1Q96MG2 331 aaPredicted RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 ERVK-6Q9BXR3 956 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 IPPKQ9H8X2 491 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ZDHHC11Q9H8X9 412 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 SNX15Q9NRS6 342 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 PNPLA3Q9NST1 481 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ALKBH4Q9NXW9 302 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 B4GALT7Q9UBV7 327 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 MTRF1LQ9UGC7 380 aaKnown RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 ERVK-19Q9WJR5 959 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 NSD1Q96L73 2696 aaPredicted RBP12.23□□□□□ -0.45
UBA3-210ENST00000485424 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 A0A0G2JMM0 328 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 A0A1W2PPB8 328 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 A0A1W2PRS3 328 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 KIR3DP1A8MWS1 328 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 CAPN14A8MX76 684 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 KLHL2O95198 593 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 C1QAP02745 245 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 CCL3P10147 92 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 ACVR2AP27037 513 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 PIK3R1P27986 724 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 MSX1P28360 303 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 SERPINB3P29508 390 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 CCNG1P51959 295 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 HNRNPH2P55795 449 aaKnown RBP12.23□□□□□ -0.45
UBA3-210ENST00000485424 NUP107P57740 925 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 IGLV3-21P80748 117 aaPredicted RBP12.23□□□□□ -0.45
UBA3-210ENST00000485424 SLC7A5Q01650 507 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 PCDH1Q08174 1060 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 EMC4Q5J8M3 183 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 HLA-DQA1Q5Y7H0 255 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 B3GNT6Q6ZMB0 384 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 GOLGA7Q7Z5G4 137 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 NUDT13Q86X67 352 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 TAGAPQ8N103 731 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 LILRB4Q8NHJ6 448 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 RIT1Q92963 219 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 SPACA9Q96E40 222 aaPredicted RBP12.23□□□□□ -0.45
UBA3-210ENST00000485424 FBXL20Q96IG2 436 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 UCK2Q9BZX2 261 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 SLC24A3Q9HC58 644 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
UBA3-210ENST00000485424 TUBA8Q9NY65 449 aaPredicted RBP12.23□□□□□ -0.45
UBA3-210ENST00000485424 ATG4BQ9Y4P1 393 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 MED12Q93074 2177 aa12.23□□□□□ -0.45
UBA3-210ENST00000485424 FAM47E-STBD1D6RA91 191 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 H0YIV9 168 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 AQP7O14520 342 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 PROM1O43490 865 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 SUSD5O60279 629 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 WDR1O75083 606 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 SMIM24O75264 130 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 PRKRAO75569 313 aaKnown RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 TOXO94900 526 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 GLSO94925 669 aaPredicted RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 CLDN9O95484 217 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 GPR75O95800 540 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 IGHG3P01860 377 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 INHBAP08476 426 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 FAM58BPP0C7Q3 252 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 MTHFD2P13995 350 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 PIGAP37287 484 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 CUL3Q13618 768 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 PCBP2Q15366 365 aaKnown RBP eCLIP12.22□□□□□ -0.45
UBA3-210ENST00000485424 PRAMEF20Q5VT98 475 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 CES4AQ5XG92 561 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 METTL2BQ6P1Q9 378 aaKnown RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 ZDHHC24Q6UX98 284 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 TRILQ7L0X0 811 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 TMEM200AQ86VY9 491 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 CCDC71Q8IV32 467 aaPredicted RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 C9orf40Q8IXQ3 194 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 DMRTC2Q8IXT2 367 aaPredicted RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 CENPLQ8N0S6 344 aaPredicted RBP12.22□□□□□ -0.45
UBA3-210ENST00000485424 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 DOK4Q8TEW6 326 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 SERPINI1Q99574 410 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 ZNF559Q9BR84 538 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 AHSPQ9NZD4 102 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 CNIH4Q9P003 139 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 TNFRSF10DQ9UBN6 386 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 TSC22D4Q9Y3Q8 395 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 LIPGQ9Y5X9 500 aa12.22□□□□□ -0.45
UBA3-210ENST00000485424 HEATR5AQ86XA9 2040 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 C2orf92A0A1B0GVN3 265 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 ESYT3A0FGR9 886 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 GLOD5A6NK44 160 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 OR6C76A6NM76 312 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms