RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 FRMD8Q9BZ67 464 aaPredicted RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 IL22Q9GZX6 179 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 MRM3Q9HC36 420 aaKnown RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 Q9N2J8 555 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 IL26Q9NPH9 171 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SMOXQ9NWM0 555 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 NLGN3Q9NZ94 848 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 EHD3Q9NZN3 535 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ICKQ9UPZ9 632 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LIPT1Q9Y234 373 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SLC17A4Q9Y2C5 497 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 OR1A2Q9Y585 309 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 KCTD3Q9Y597 815 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 PCDHGA1Q9Y5H4 931 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 CLDN16Q9Y5I7 305 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 GLYATL1P3A0A0U1RQE8 302 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TMEM202A6NGA9 273 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TRIM64CA6NLI5 447 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 K7ESM1 405 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 CHUKO15111 745 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PGRMC2O15173 223 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 AQP9O43315 295 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 NUAK1O60285 661 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 NCR1O76036 304 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SRP72O76094 671 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SLC25A14O95258 325 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 GUCA1CO95843 209 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 HOXB5P09067 269 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 RFPL3SP0C7P2 107 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PIRTP0C851 137 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ZSCAN5DPP0CG00 497 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ITGAXP20702 1163 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TCEA1P23193 301 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 DUSP3P51452 185 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF140P52738 457 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TUBB4BP68371 445 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SIM1P81133 766 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 DR1Q01658 176 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ACVR1Q04771 509 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 CKAP4Q07065 602 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 NFATC2Q13469 925 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF273Q14593 569 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 KCNJ11Q14654 390 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 LASP1Q14847 261 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PTPRRQ15256 657 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PPP1R7Q15435 360 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TRIP6Q15654 476 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SNAPC1Q16533 368 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 WHAMMP3Q1A5X7 153 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PCGF3Q3KNV8 242 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 KRTAP21-3Q3LHN1 58 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 GLE1Q53GS7 698 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PCID2Q5JVF3 399 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TPRG1LQ5T0D9 272 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TMEM268Q5VZI3 342 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TTC27Q6P3X3 843 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 UNC5DQ6UXZ4 953 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SYT10Q6XYQ8 523 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TAOK1Q7L7X3 1001 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SNX20Q7Z614 316 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 KLBQ86Z14 1044 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 NAXDQ8IW45 347 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PEX5LQ8IYB4 626 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PELI3Q8N2H9 469 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 BBOF1Q8ND07 529 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF548Q8NEK5 533 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 DDHD1Q8NEL9 900 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SPATA4Q8NEY3 305 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ABHD11Q8NFV4 315 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TSPAN14Q8NG11 270 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 OR4K2Q8NGD2 314 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 OR52K1Q8NGK4 314 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF398Q8TD17 642 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SETD7Q8WTS6 366 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 GLYATL1Q969I3 302 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ULK4Q96C45 1275 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 CDKN2AIPNLQ96HQ2 116 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SMIM14Q96QK8 99 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ALG8Q9BVK2 526 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SPATA16Q9BXB7 569 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 GSDMCQ9BYG8 508 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 DDX47Q9H0S4 455 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 PRORYQ9H606 182 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 DENND2DQ9H6A0 471 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SIRT3Q9NTG7 399 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 NLE1Q9NVX2 485 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 CRNNQ9UBG3 495 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 APOBEC3BQ9UH17 382 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TBK1Q9UHD2 729 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 CD84Q9UIB8 345 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 SH3BGRL2Q9UJC5 107 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 EXO1Q9UQ84 846 aaKnown RBP5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 CARD8Q9Y2G2 431 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 TCAF1Q9Y4C2 921 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 LIPGQ9Y5X9 500 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 ARL5AQ9Y689 179 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 MAU2Q9Y6X3 613 aa5.3□□□□□ -1.56
NHLRC3-205ENST00000485407 MGAQ8IWI9 3026 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms