RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 URGCPQ8TCY9 931 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF75CPQ92670 426 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 ULK4Q96C45 1275 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 TMEM237Q96Q45 408 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 GAL3ST4Q96RP7 486 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 RBM4BQ9BQ04 359 aaKnown RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 SLC39A3Q9BRY0 314 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 CABLES2Q9BTV7 478 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 MCRIP2Q9BUT9 160 aaKnown RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 NAPBQ9H115 298 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 STMN4Q9H169 189 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 VCX3BQ9H321 246 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 CLSTN2Q9H4D0 955 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 DCLRE1BQ9H816 532 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 VPS37BQ9H9H4 285 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 S100A14Q9HCY8 104 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 STARD5Q9NSY2 213 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 HPF1Q9NWY4 346 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 TEX10Q9NXF1 929 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 PLEK2Q9NYT0 353 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 NLGN3Q9NZ94 848 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 AKAP7Q9P0M2 348 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 HMG20BQ9P0W2 317 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 CTSZQ9UBR2 303 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 BAIAP2L1Q9UHR4 511 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 SPATA2Q9UM82 520 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 EXOC7Q9UPT5 735 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 ERVK-19Q9WJR5 959 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 RNF215Q9Y6U7 377 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 MYH15Q9Y2K3 1946 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 SPAG9O60271 1321 aaKnown RBP1.85□□□□□ -2.11
ITGB1-213ENST00000484088 ZMYM6O95789 1325 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 RNF123Q5XPI4 1314 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 RAD50Q92878 1312 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 SALL1Q9NSC2 1324 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 NINLQ9Y2I6 1382 aa1.85□□□□□ -2.11
ITGB1-213ENST00000484088 IGLV4-3A0A075B6K6 122 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 IGHV3-16A0A0C4DH30 117 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 A0A0U1RRA0 63 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 A0A1B0GU03 582 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 LOC390937A0A1W2PQ73 354 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TMEM89A2RUT3 159 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC69A6NI79 296 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 KPNA7A9QM74 516 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CSO75390 466 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CRLF1O75462 422 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PALMO75781 387 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 S100A6P06703 90 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 THEGLP0DJG4 465 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PCP11498 1178 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 FOSL2P15408 326 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ARF4P18085 180 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 AOC1P19801 751 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 HLA-DPA1P20036 260 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 AHCYP23526 432 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ACP1P24666 158 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TMOD1P28289 359 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 FCGR2BP31994 310 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 FCGR2CP31995 323 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 NF2P35240 595 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TRIM23P36406 574 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ASMTP46597 345 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CSRP3P50461 194 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ATP4BP51164 291 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PSMD7P51665 324 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CCL11P51671 97 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 LIMK2P53671 638 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 FKBP3Q00688 224 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CD300CQ08708 224 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CBX3Q13185 183 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ENPP2Q13822 863 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 SLC17A1Q14916 467 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 MTHFSDQ2M296 383 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TAF1BQ53T94 588 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 HERC4Q5GLZ8 1057 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ZCCHC12Q6PEW1 402 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CNSTQ6PJW8 725 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 DOK6Q6PKX4 331 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 UNC5DQ6UXZ4 953 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 RFPL4BQ6ZWI9 263 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 FAM131BQ86XD5 332 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF440Q8IYI8 595 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF619Q8N2I2 560 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PARP8Q8N3A8 854 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 RELL2Q8NC24 303 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC197Q8NCU1 140 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TMEM185AQ8NFB2 350 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC148Q8NFR7 591 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 OR52K2Q8NGK3 314 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 OR6F1Q8NGZ6 308 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 FBXO30Q8TB52 745 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 GOLGA5Q8TBA6 731 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ACMSDQ8TDX5 336 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CHPT1Q8WUD6 406 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ESAMQ96AP7 390 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TMEM186Q96B77 213 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 RAB39BQ96DA2 213 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 NRBF2Q96F24 287 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms