RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 ERAL1O75616 437 aaKnown RBP24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 HSPA4LO95757 839 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 SLC35E2P0CK97 266 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 PRPH2P23942 346 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 XKP51811 444 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 DUSP2Q05923 314 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 TUBA3CQ13748 450 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 KIAA0040Q15053 153 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 NR6A1Q15406 480 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 ZNF468Q5VIY5 522 aaPredicted RBP24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 TUBA3EQ6PEY2 450 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 CDC26Q8NHZ8 85 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 SENP5Q96HI0 755 aaPredicted RBP24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 PELOQ9BRX2 385 aaKnown RBP24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 CNPPD1Q9BV87 410 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 LRTM1Q9HBL6 345 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 ABI3Q9P2A4 366 aa24.64■■□□□ 1.54
GTF3C4-202ENST00000483873 NPIPB8E9PQR5 432 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 RGS14O43566 566 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 SEC22BO75396 215 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 ZFAND5O76080 213 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 IGKV3-11P04433 115 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 PTGER1P34995 402 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 ABCE1P61221 599 aaKnown RBP24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 ERVK-8P63133 956 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 SPRED3Q2MJR0 410 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 NOXRED1Q6NXP6 359 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 HSDL2Q6YN16 418 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 ARMC10Q8N2F6 343 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 CPT1CQ8TCG5 803 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 RIT1Q92963 219 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 KLHL29Q96CT2 875 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 FBXL20Q96IG2 436 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 SIGLEC12Q96PQ1 595 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 C1orf109Q9NX04 203 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 ERVK-19Q9WJR5 959 aa24.63■■□□□ 1.53
GTF3C4-202ENST00000483873 TMEM114B3SHH9 223 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 SKAP2O75563 359 aaPredicted RBP24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 CT62P0C5K7 136 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 NEFHP12036 1026 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 CPMP14384 443 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 FEN1P39748 380 aaKnown RBP24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 CD96P40200 585 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 ZNF763Q0D2J5 394 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 ZNF267Q14586 743 aaPredicted RBP24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 INPP5JQ15735 1006 aaPredicted RBP24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 IGFBP7Q16270 282 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 CISD2Q8N5K1 135 aaKnown RBP24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 COPS7AQ9UBW8 275 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 GIMAP2Q9UG22 337 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 NTNG1Q9Y2I2 539 aa24.62■■□□□ 1.53
GTF3C4-202ENST00000483873 TRAV17A0A0B4J275 112 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 J3QKU1 62 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 LSM1O15116 133 aaKnown RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 PORP16435 677 aaPredicted RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 ZNF781Q8N8C0 355 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 SNRNP40Q96DI7 357 aaKnown RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 C19orf60Q96EN9 201 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 CNRIP1Q96F85 164 aaPredicted RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 C3orf30Q96M34 536 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 UTP23Q9BRU9 249 aaKnown RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 CXorf21Q9HAI6 301 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 UTS2RQ9UKP6 389 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 DYRK3O43781 588 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 ITGA10O75578 1167 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 DRD2P14416 443 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 TACR1P25103 407 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 GALNSP34059 522 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 SLC1A6P48664 564 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 RPL38P63173 70 aaKnown RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 RNF4P78317 190 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 OC90Q02509 493 aaPredicted RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 GALNTL6Q49A17 601 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 XKR7Q5GH72 579 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 C9orf40Q8IXQ3 194 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 MDS2Q8NDY4 140 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 FAM76AQ8TAV0 307 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 EXOSC8Q96B26 276 aaKnown RBP24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 ART5Q96L15 291 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 ZNF681Q96N22 645 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 SORT1Q99523 831 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 HES7Q9BYE0 225 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 MAP10Q9P2G4 905 aa24.61■■□□□ 1.53
GTF3C4-202ENST00000483873 NBASA2RRP1 2371 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 FCHO1O14526 889 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 CLPSP04118 112 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 JUNP05412 331 aaKnown RBP24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 NT5EP21589 574 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 GRK2P25098 689 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 HK2P52789 917 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 C2orf80Q0P641 193 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 BST1Q10588 318 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 HEPACAMQ14CZ8 416 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 OR1C1Q15619 314 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 RFTN2Q52LD8 501 aaPredicted RBP24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 SPINK14Q6IE38 97 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 FAM71E1Q6IPT2 247 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 GALNT12Q8IXK2 581 aa24.6■■□□□ 1.53
GTF3C4-202ENST00000483873 MIB2Q96AX9 1013 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms