RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RPS26P11Q5JNZ5 115 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF691Q5VV52 312 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF605Q86T29 641 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 SAMD14Q8IZD0 417 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 CAMKK1Q8N5S9 505 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 HDAC2Q92769 488 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 CLDN23Q96B33 292 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 DGCR14Q96DF8 476 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 KLHL25Q9H0H3 589 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 LYRM4Q9HD34 91 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 MS4A12Q9NXJ0 267 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 FBXL21Q9UKT6 434 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 DAPP1Q9UN19 280 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 PCDHGA8Q9Y5G5 932 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF780BQ9Y6R6 833 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ENPP4Q9Y6X5 453 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 A0A1W2PS29 197 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 TMEM247A6NEH6 219 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 A8MVJ9 347 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 B4DGG1 531 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 TLR4O00206 839 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 TNFRSF11BO00300 401 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 EMC8O43402 210 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 SH3BP5O60239 455 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 OR6B1O95007 311 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 C8orf89P0DMQ9 161 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 OR12D1P0DN82 309 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ALOX12P18054 663 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 CDH2P19022 906 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 CPN2P22792 545 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 POLR2IP36954 125 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 FEN1P39748 380 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 LIMS1P48059 325 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 PXNP49023 591 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 HMGA2P52926 109 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ISL1P61371 349 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 PRR5P85299 388 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 KEAP1Q14145 624 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 CNPY1Q3B7I2 92 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 RBM48Q5RL73 367 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 SIX5Q8N196 739 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF655Q8N720 491 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ZCCHC10Q8TBK6 192 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 RASSF5Q8WWW0 418 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ELP4Q96EB1 424 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 PIP5K1AQ99755 562 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 TREX2Q9BQ50 279 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 RSPO3Q9BXY4 272 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 YIPF3Q9GZM5 350 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ING2Q9H160 280 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 BCL2L10Q9HD36 194 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 EXD2Q9NVH0 621 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 DNAAF2Q9NVR5 837 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 NTMQ9P121 344 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 GPC6Q9Y625 555 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 SLC22A7Q9Y694 548 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 BCKDKO14874 412 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 RHCEP18577 417 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 ELK4P28324 431 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 RGS19P49795 217 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 PPP1CAP62136 330 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.41
CPNE1-225ENST00000483495 PRAMEF8Q5VWM4 474 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 PRAMEF7Q5VXH5 474 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 TMEM107Q6UX40 140 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF761Q86XN6 746 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-225ENST00000483495 GKN2Q86XP6 184 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 LGI4Q8N135 537 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 DEFB119Q8N690 84 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 CHDHQ8NE62 594 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-225ENST00000483495 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 NCSTNQ92542 709 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF607Q96SK3 696 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 PSD2Q9BQI7 771 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 KCND3Q9UK17 655 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 TESMINQ9Y4I5 508 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 HSPE1-MOB4S4R3N1 261 aa12.47□□□□□ -0.41
CPNE1-225ENST00000483495 ASNA1O43681 348 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 SLC28A2O43868 658 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 IFNW1P05000 195 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 HMGN2P05204 90 aaKnown RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 FESP07332 822 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 FOSL2P15408 326 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 PPP2R1BP30154 601 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 TLX1P31314 330 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 KCNJ5P48544 419 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 CLK3P49761 638 aaKnown RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 CD47Q08722 323 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 SYPL1Q16563 259 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 C6orf141Q5SZD1 244 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 LAIR2Q6ISS4 152 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 ARMC6Q6NXE6 501 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 RBM44Q6ZP01 1051 aaKnown RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF438Q7Z4V0 828 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 GALNT5Q7Z7M9 940 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 C17orf82Q86X59 251 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 LRRC25Q8N386 305 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms