RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PDE7AQ13946 482 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 PGS1Q32NB8 556 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 TMEM102Q8N9M5 508 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-224ENST00000483359 EXTL1Q92935 676 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 ZNF681Q96N22 645 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 BRINP2Q9C0B6 783 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 OR8D2Q9GZM6 311 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 KLHL14Q9P2G3 628 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 KCNMB2Q9Y691 235 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 A0A1W2PQ72 361 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 HRKO00198 91 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 PDPK1O15530 556 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 LAMP1P11279 417 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 NCF2P19878 526 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-224ENST00000483359 NCBP2P52298 156 aaKnown RBP eCLIP16.65■□□□□ 0.269e-8■□□□□ 9.8
CPNE1-224ENST00000483359 RRADP55042 308 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 SLC26A5P58743 744 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 MPEG1Q2M385 716 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 R3HCC1LQ7Z5L2 792 aaKnown RBP16.65■□□□□ 0.26
CPNE1-224ENST00000483359 RIMKLAQ8IXN7 391 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 ZNF321PQ8N8H1 164 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 OR9I1Q8NGQ6 314 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 OR9A2Q8NGT5 310 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 RIT1Q92963 219 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 SLAMF7Q9NQ25 335 aa16.65■□□□□ 0.26
CPNE1-224ENST00000483359 CT62P0C5K7 136 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ITGA3P26006 1051 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 NTSP30990 170 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 MRPS35P82673 323 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 CPTPQ5TA50 214 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 CPLX4Q7Z7G2 160 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 GALNT12Q8IXK2 581 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 KIF2BQ8N4N8 673 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 OR14A16Q8NHC5 309 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 SUN3Q8TAQ9 357 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 IMMP1LQ96LU5 166 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ELAC2Q9BQ52 826 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 NSRP1Q9H0G5 558 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ATP6V1HQ9UI12 483 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 DRD4P21917 467 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 RPL3P39023 403 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 CCL11P51671 97 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 STX1BP61266 288 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 HSPB3Q12988 150 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ZNF267Q14586 743 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 GSTA3Q16772 222 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 BORAQ6PGQ7 559 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 PAOXQ6QHF9 649 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 FAM9CQ8IZT9 166 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 B3GNT7Q8NFL0 401 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 SLC2A12Q8TD20 617 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 SNRNP27Q8WVK2 155 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 DAZLQ92904 295 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 NCLNQ969V3 563 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 MTERF3Q96E29 417 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 PELOQ9BRX2 385 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ATP13A2Q9NQ11 1180 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ADAM21Q9UKJ8 722 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ERVK-19Q9WJR5 959 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 COPG1Q9Y678 874 aaKnown RBP16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ATMQ13315 3056 aa16.64■□□□□ 0.25
CPNE1-224ENST00000483359 ITPR1Q14643 2758 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 SYNDIG1LA6NDD5 238 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 ATP1B1P05026 303 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 IL12AP29459 219 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 AIMP2Q13155 320 aaKnown RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 FAM174BQ3ZCQ3 159 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 GLIPR1L2Q4G1C9 344 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 PDCD4Q53EL6 469 aaKnown RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 SPANXN4Q5MJ08 99 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 C6orf163Q5TEZ5 329 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 PLAG1Q6DJT9 500 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 FAM111BQ6SJ93 734 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 GPR155Q7Z3F1 870 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 SPATA21Q7Z572 469 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 SAMD14Q8IZD0 417 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 MIER2Q8N344 545 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 NFAM1Q8NET5 270 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 C10orf82Q8WW14 230 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 APOBEC4Q8WW27 367 aaKnown RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 THOC3Q96J01 351 aaKnown RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 PRPF18Q99633 342 aaKnown RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 GLIPR2Q9H4G4 154 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 PRORYQ9H606 182 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 ANKRA2Q9H9E1 313 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 SDR39U1Q9NRG7 319 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-224ENST00000483359 TAS2R7Q9NYW3 318 aa16.63■□□□□ 0.25
CPNE1-224ENST00000483359 MED13Q9UHV7 2174 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 MYO1GB0I1T2 1018 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 DYRK3O43781 588 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 DDAH2O95865 285 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 ITGAMP11215 1152 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 MPIP34949 423 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 BIKQ13323 160 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 TERF2Q15554 542 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 CEBPEQ15744 281 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 EXT1Q16394 746 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 TBR1Q16650 682 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 PRICKLE4Q2TBC4 344 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms