RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 KIAA1143Q96AT1 154 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 MSANTD3Q96H12 275 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 MND1Q9BWT6 205 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ANKRA2Q9H9E1 313 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 RDH14Q9HBH5 336 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 COMMD3Q9UBI1 195 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 RABL2AQ9UBK7 228 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 FABP7O15540 132 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 HCN1O60741 890 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ETHE1O95571 254 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 C1SP09871 688 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 PTX3P26022 381 aaPredicted RBP13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ACSM2AQ08AH3 577 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 RAB33AQ14088 237 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 PLPP4Q5VZY2 271 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ACSM2BQ68CK6 577 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 HSDL2Q6YN16 418 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 DDX53Q86TM3 631 aaKnown RBP13.59□□□□□ -0.23
COL9A2-207ENST00000482722 NANOGP1Q8N7R0 232 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 TMEM145Q8NBT3 493 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 C11orf65Q8NCR3 313 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 FAM46DQ8NEK8 389 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 GPATCH2Q9NW75 528 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 FAM120CQ9NX05 1096 aaKnown RBP13.59□□□□□ -0.23
COL9A2-207ENST00000482722 GREM1O60565 184 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF821O75541 412 aaPredicted RBP13.59□□□□□ -0.23
COL9A2-207ENST00000482722 RFPL3O75679 317 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 MYOGP15173 224 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ETV3P41162 512 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 PTSQ03393 145 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 XKR6Q5GH73 641 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 CPTPQ5TA50 214 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 CNIH2Q6PI25 160 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 TEX261Q6UWH6 196 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF680Q8NEM1 530 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 NFKBIDQ8NI38 313 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 MTERF3Q96E29 417 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 NELL2Q99435 816 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 AIFM2Q9BRQ8 373 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 MARVELD1Q9BSK0 173 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 VPS29Q9UBQ0 182 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 AUP1Q9Y679 476 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 U3KQ87 197 aa13.59□□□□□ -0.23
COL9A2-207ENST00000482722 ORC5O43913 435 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 HLA-DQB1P01920 261 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 PRPH2P23942 346 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 RGS1Q08116 209 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 MLLT11Q13015 90 aaPredicted RBP13.58□□□□□ -0.23
COL9A2-207ENST00000482722 SNTA1Q13424 505 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 MFSD13AQ14CX5 517 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 POU4F3Q15319 338 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 POM121L1PQ3SYA9 428 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 C1orf52Q8N6N3 182 aaKnown RBP13.58□□□□□ -0.23
COL9A2-207ENST00000482722 OR4A15Q8NGL6 344 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 AKAP1Q92667 903 aaKnown RBP eCLIP13.58□□□□□ -0.23
COL9A2-207ENST00000482722 GPR137Q96N19 417 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 SLC6A18Q96N87 628 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 RC3H2Q9HBD1 1191 aaKnown RBP13.58□□□□□ -0.23
COL9A2-207ENST00000482722 FZD3Q9NPG1 666 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 DNAJC11Q9NVH1 559 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 UCKL1Q9NWZ5 548 aa13.58□□□□□ -0.23
COL9A2-207ENST00000482722 GNG14A0A1W2PPG7 69 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 C1orf226A1L170 272 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 TLR4O00206 839 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 SLC43A1O75387 559 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 C8AP07357 584 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF782Q6ZMW2 699 aaPredicted RBP13.58□□□□□ -0.24
COL9A2-207ENST00000482722 TPRG1Q6ZUI0 275 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 USP45Q70EL2 814 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 LRRC70Q7Z2Q7 622 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 OR8J2Q8NGG1 315 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 MAGEB10Q96LZ2 347 aaPredicted RBP13.58□□□□□ -0.24
COL9A2-207ENST00000482722 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 LINC00597Q9H2U6 94 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 PPP1R3EQ9H7J1 279 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
COL9A2-207ENST00000482722 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
COL9A2-207ENST00000482722 MAP4K5Q9Y4K4 846 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
COL9A2-207ENST00000482722 PRAMEF33A0A0G2JMD5 474 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 INMT-MINDY4F8WBC2 141 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 PRAMEF10O60809 474 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SOCS5O75159 536 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 TIMP1P01033 207 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SUZ12Q15022 739 aaKnown RBP13.57□□□□□ -0.24
COL9A2-207ENST00000482722 GALNT11Q8NCW6 608 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 OR52P1PQ8NH57 321 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 AP2M1Q96CW1 435 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SLC12A9Q9BXP2 914 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 MTG2Q9H4K7 406 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 NMNAT1Q9HAN9 279 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-207ENST00000482722 A8MVJ9 347 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 E7EQ34 232 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 GADD45GO95257 159 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ANXA4P09525 319 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms