RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 ASPHQ12797 758 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 KRTCAP3Q53RY4 240 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 FAM219BQ5XKK7 198 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 OPN5Q6U736 354 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 DGAT2L6Q6ZPD8 337 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 SULF2Q8IWU5 870 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 PSD4Q8NDX1 1056 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 NUBPLQ8TB37 319 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 SLC22A8Q8TCC7 542 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 DOK4Q8TEW6 326 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 AENQ8WTP8 325 aaKnown RBP13.74□□□□□ -0.21
OPTN-210ENST00000482140 GPR137Q96N19 417 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 GAL3ST4Q96RP7 486 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 KCNA7Q96RP8 456 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 C12orf65Q9H3J6 166 aaKnown RBP13.74□□□□□ -0.21
OPTN-210ENST00000482140 PSME2Q9UL46 239 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 NPIPA1Q9UND3 350 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 PCDHA9Q9Y5H5 950 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 ICE1Q9Y2F5 2266 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 SPTBN1Q01082 2364 aaKnown RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 TRGV8A0A0C4DH27 118 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 GNG14A0A1W2PPG7 69 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 HRKO00198 91 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 TFECO14948 347 aaPredicted RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 PCDH7O60245 1069 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 ERAL1O75616 437 aaKnown RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 LDLRP01130 860 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 STSP08842 583 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 GP1BBP13224 206 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 NT5EP21589 574 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 ALDH9A1P49189 494 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 CASP6P55212 293 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 GPR85P60893 370 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 TRA2BP62995 288 aaKnown RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 IMPG1Q17R60 797 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 23
OPTN-210ENST00000482140 SPIN4Q56A73 249 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 SPDYAQ5MJ70 313 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 C1QL3Q5VWW1 255 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 LIPMQ5VYY2 423 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 SCIMPQ6UWF3 145 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 RTL4Q6ZR62 310 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 FRMD7Q6ZUT3 714 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 MDGA2Q7Z553 956 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 FJX1Q86VR8 437 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 GALNT12Q8IXK2 581 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 C9orf40Q8IXQ3 194 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 SRRM1Q8IYB3 904 aaKnown RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 CHTF18Q8WVB6 975 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 CAVIN3Q969G5 261 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 TM4SF18Q96CE8 201 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 APOPT1Q96IL0 206 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 MAGED4Q96JG8 741 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 ACPTQ9BZG2 426 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 ROPN1BQ9BZX4 212 aaPredicted RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 ROPN1Q9HAT0 212 aaPredicted RBP13.73□□□□□ -0.21
OPTN-210ENST00000482140 OXSMQ9NWU1 459 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 MCM8Q9UJA3 840 aa13.73□□□□□ -0.21
OPTN-210ENST00000482140 EML6Q6ZMW3 1958 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 A1L4Q6 167 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 RNF224P0DH78 156 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 CPMP14384 443 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 CHN1P15882 459 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 PORP16435 677 aaPredicted RBP13.72□□□□□ -0.21
OPTN-210ENST00000482140 SLC37A1P57057 533 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 HMGCS1Q01581 520 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 BTKQ06187 659 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 MPEG1Q2M385 716 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 ERCC6LQ2NKX8 1250 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 ZNF750Q32MQ0 723 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 PIGGQ5H8A4 983 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 HLA-DQA1Q5Y7H0 255 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 SLC48A1Q6P1K1 146 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 TRABD2AQ86V40 505 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 GHDCQ8N2G8 530 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 KLHL29Q96CT2 875 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 SGCZQ96LD1 299 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 CXorf21Q9HAI6 301 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 PFDN4Q9NQP4 134 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 MKS1Q9NXB0 559 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 LGALS13Q9UHV8 139 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 SH3BGRL2Q9UJC5 107 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 ZNF780BQ9Y6R6 833 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 MYO7BQ6PIF6 2116 aa13.72□□□□□ -0.21
OPTN-210ENST00000482140 A0A1W2PS29 197 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 UBFD1O14562 309 aaKnown RBP13.71□□□□□ -0.21
OPTN-210ENST00000482140 ASNA1O43681 348 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 SLC19A2O60779 497 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 P04436 131 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 CSNK2A2P19784 350 aaPredicted RBP13.71□□□□□ -0.21
OPTN-210ENST00000482140 SSTR4P31391 388 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 RFC3P40938 356 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 FOXA1P55317 472 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 PLGLB1Q02325 96 aa13.71□□□□□ -0.21
OPTN-210ENST00000482140 GTF3C1Q12789 2109 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms