RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 C10orf62Q5T681 223 aaPredicted RBP13.68□□□□□ -0.22
CHD3-211ENST00000481999 TSEN54Q7Z6J9 526 aaKnown RBP13.68□□□□□ -0.22
CHD3-211ENST00000481999 SLCO6A1Q86UG4 719 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
CHD3-211ENST00000481999 RGMAQ96B86 450 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 YIPF6Q96EC8 236 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 VMP1Q96GC9 406 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 WDR12Q9GZL7 423 aaKnown RBP13.68□□□□□ -0.22
CHD3-211ENST00000481999 LMAN1LQ9HAT1 526 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 C1GALT1Q9NS00 363 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 TMEM184CQ9NVA4 438 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 CHCHD3Q9NX63 227 aaKnown RBP13.68□□□□□ -0.22
CHD3-211ENST00000481999 AHSPQ9NZD4 102 aa13.68□□□□□ -0.22
CHD3-211ENST00000481999 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.68□□□□□ -0.22
CHD3-211ENST00000481999 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 OR6C74A6NCV1 312 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 SEMA3DO95025 777 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 MT-ND2P03891 347 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 AKT2P31751 481 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PCGF2P35227 344 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 RXRGP48443 463 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 SERPINB10P48595 397 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 CSNK2BP67870 215 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 NPRL3Q12980 569 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 SLAMF1Q13291 335 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 SMAD4Q13485 552 aaKnown RBP13.67□□□□□ -0.22
CHD3-211ENST00000481999 ATP1A4Q13733 1029 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 UBXN2BQ14CS0 331 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 TEAD4Q15561 434 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 TOR1AIP1Q5JTV8 583 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 LAIR1Q6GTX8 287 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PRSS48Q7RTY5 328 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 VN1R4Q7Z5H5 301 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 OR5D16Q8NGK9 328 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 GOT1L1Q8NHS2 421 aaPredicted RBP13.67□□□□□ -0.22
CHD3-211ENST00000481999 DOK4Q8TEW6 326 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 S100ZQ8WXG8 99 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 TAMM41Q96BW9 452 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 C7orf34Q96L11 122 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 SLC6A18Q96N87 628 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
CHD3-211ENST00000481999 PCDHGB3Q9Y5G1 929 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 COLEC10Q9Y6Z7 277 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 A0A1W2PR48 441 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 TRBC2A0A5B9 178 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 HCRTR1O43613 425 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 MAN1A2O60476 641 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PSMB9P28065 219 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 EPHA2P29317 976 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 IDUAP35475 653 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 LSSP48449 732 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 MASP1P48740 699 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PSMD7P51665 324 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 KCNJ10P78508 379 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 EIF2B5Q13144 721 aaKnown RBP13.67□□□□□ -0.22
CHD3-211ENST00000481999 DGUOKQ16854 277 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 FBXO43Q4G163 708 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 IQCCQ4KMZ1 466 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 CCDC81Q6ZN84 652 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 HORMAD2Q8N7B1 307 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 ACOT4Q8N9L9 421 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 C11orf65Q8NCR3 313 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 DENND6BQ8NEG7 585 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 FLVCR1-AS1Q8TAF5 88 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 ZCCHC10Q8TBK6 192 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 HLA-CQ95604 372 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PRDM7Q9NQW5 492 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 EVA1BQ9NVM1 165 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 PADI2Q9Y2J8 665 aa13.67□□□□□ -0.22
CHD3-211ENST00000481999 FUOMA2VDF0 154 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 J3KTA2 159 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 PDPK1O15530 556 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 P2RX6O15547 441 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 APBB3O95704 486 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 CTSBP07858 339 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 THEGLP0DJG4 465 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SRFP11831 508 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 KRT20P35900 424 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 PRIM2P49643 509 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 RPP38P78345 283 aaKnown RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 TDGQ13569 410 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 TP53BP2Q13625 1128 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SCARB2Q14108 478 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 HEPACAMQ14CZ8 416 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ADPRMQ3LIE5 342 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 TJAP1Q5JTD0 557 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ZNF425Q6IV72 752 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 NIPAL1Q6NVV3 410 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 OR52N2Q8NGI0 321 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 YIPF4Q9BSR8 244 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 DOHHQ9BU89 302 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SERHL2Q9H4I8 314 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 RUBCNLQ9H714 662 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 DDX31Q9H8H2 851 aaKnown RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 ACOT13Q9NPJ3 140 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 LOC105369274A0A096LPK9 316 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms