RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 NCLNQ969V3 563 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 FUBP1Q96AE4 644 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 GPR137Q96N19 417 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 OR14A2Q96R54 314 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 GPA33Q99795 319 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 FSD1LQ9BXM9 530 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 TM6SF1Q9BZW5 370 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 NACA2Q9H009 215 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 SEMA6AQ9H2E6 1030 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 HIPK2Q9H2X6 1198 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 SLC52A3Q9NQ40 469 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 TMEM74BQ9NUR3 256 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 DBNLQ9UJU6 430 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 ANGPTL2Q9UKU9 493 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 FZD1Q9UP38 647 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 E9PI62 339 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 H0Y8G0 127 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 CETN3O15182 167 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 NBR2O15453 112 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 NFATC1O95644 943 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 ACAA1P09110 424 aaPredicted RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 NHLRC4P0CG21 123 aaPredicted RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 SP9P0CG40 484 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 ACP2P11117 423 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 RALBP11234 206 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 UBA1P22314 1058 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 CLDN20P56880 219 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 ZFP36L1Q07352 338 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 TOB2Q14106 344 aaPredicted RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 PDK3Q15120 406 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 P2RY14Q15391 338 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 XKR4Q5GH76 650 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 SPOUT1Q5T280 376 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 NIPA1Q7RTP0 329 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 LIMS2Q7Z4I7 341 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 CIR1Q86X95 450 aaPredicted RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 UBALD2Q8IYN6 164 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 SIDT2Q8NBJ9 832 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 OR4K14Q8NGD5 310 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 OR1E3Q8WZA6 343 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 MTERF1Q99551 399 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 MTG1Q9BT17 334 aaPredicted RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 FAM192AQ9GZU8 254 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 P2RX2Q9UBL9 471 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 MRPL11Q9Y3B7 192 aaKnown RBP3.05□□□□□ -1.92
SMC6-208ENST00000481708 DMXL1Q9Y485 3027 aa3.05□□□□□ -1.92
SMC6-208ENST00000481708 TCHHQ07283 1943 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CACNA1AO00555 2505 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ILVBLA1L0T0 632 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SH3PXD2BA1X283 911 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 WRBO00258 174 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 FOXS1O43638 330 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 EFNA2O43921 213 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 GJB5O95377 273 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HLA-DQA2P01906 255 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SERPINF2P08697 491 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SP100P23497 879 aaPredicted RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 U2AF2P26368 475 aaKnown RBP eCLIP3.04□□□□□ -1.92
SMC6-208ENST00000481708 GNL1P36915 607 aaPredicted RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 BTDP43251 543 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CDH18Q13634 790 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TEX35Q5T0J7 233 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TCERG1LQ5VWI1 586 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TCTN3Q6NUS6 607 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TRMT1LQ7Z2T5 733 aaKnown RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 FAM124AQ86V42 546 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ZNF565Q8N9K5 539 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SMYD1Q8NB12 490 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 BHLHE22Q8NFJ8 381 aaPredicted RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 TFAP2BQ92481 460 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 NRGNQ92686 78 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 DEFB118Q96PH6 123 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 C11orf70Q9BRQ4 267 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 FAM213AQ9BRX8 229 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SEC61A2Q9H9S3 476 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 GTSE1Q9NYZ3 720 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TRPM5Q9NZQ8 1165 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 PPP4R1LQ9P1A2 415 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 FAM90A26D6RGX4 464 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 E9PQ18 207 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 FDFT1P37268 417 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HAAOP46952 286 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 RAP1GAPP47736 663 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CTSCP53634 463 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 NAAAQ02083 359 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HYAL1Q12794 435 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 RBBP5Q15291 538 aaKnown RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 NPTX1Q15818 432 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 AANATQ16613 207 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CA9Q16790 459 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TTC23LQ6PF05 361 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SYT10Q6XYQ8 523 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 RBM44Q6ZP01 1051 aaKnown RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 STOX1Q6ZVD7 989 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ZNF367Q7RTV3 350 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ANKRD46Q86W74 232 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.04□□□□□ -1.92
SMC6-208ENST00000481708 MYOCDQ8IZQ8 938 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ZNF611Q8N823 705 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 OR9K2Q8NGE7 335 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms