RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PROM1O43490 865 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 TMPRSS11DO60235 418 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 KLK8O60259 260 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 LRATO95237 230 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 NADKO95544 446 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 GPR75O95800 540 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 GBAP04062 536 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 FAM58BPP0C7Q3 252 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 PHBP35232 272 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 BSGP35613 385 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 FOXO1Q12778 655 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 PCBP2Q15366 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 ZNF791Q3KP31 576 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 B3GNT6Q6ZMB0 384 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 CDH24Q86UP0 819 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 NUDT13Q86X67 352 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 PTGR2Q8N8N7 351 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 ACBD4Q8NC06 268 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 KIF18AQ8NI77 898 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 RIT1Q92963 219 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 JSRP1Q96MG2 331 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 CDK15Q96Q40 435 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 LRRC1Q9BTT6 524 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 ZNF717Q9BY31 904 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 MCCC2Q9HCC0 563 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 NPDC1Q9NQX5 325 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 BOKQ9UMX3 212 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 TSC22D4Q9Y3Q8 395 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 ASB4Q9Y574 426 aa14.06□□□□□ -0.16
LIMS3-203ENST00000480744 TNPO3Q9Y5L0 923 aaKnown RBP14.06□□□□□ -0.16
LIMS3-203ENST00000480744 A0A0A6YYD5 115 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 TRGV5A0A0B4J1U4 118 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 CCDC189A1A4V9 331 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 AQP7O14520 342 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 UGDHO60701 494 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 TOXO94900 526 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 CLDN9O95484 217 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 AIFM1O95831 613 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 ALDOAP04075 364 aaKnown RBP14.05□□□□□ -0.16
LIMS3-203ENST00000480744 CAPN3P20807 821 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 ARFIP1P53367 373 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 CUL3Q13618 768 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 UBAP2Q5T6F2 1119 aaKnown RBP14.05□□□□□ -0.16
LIMS3-203ENST00000480744 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 MRM1Q6IN84 353 aaKnown RBP14.05□□□□□ -0.16
LIMS3-203ENST00000480744 LYPD8Q6UX82 237 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 SLC15A4Q8N697 577 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 OR10G3Q8NGC4 313 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 PAQR8Q8TEZ7 354 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 UCN3Q969E3 161 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 SARAFQ96BY9 339 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 PHF21BQ96EK2 531 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 GPR78Q96P69 363 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 TTYH2Q9BSA4 534 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 WWTR1Q9GZV5 400 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 NOL11Q9H8H0 719 aaKnown RBP14.05□□□□□ -0.16
LIMS3-203ENST00000480744 DDX31Q9H8H2 851 aaKnown RBP14.05□□□□□ -0.16
LIMS3-203ENST00000480744 ZDHHC18Q9NUE0 388 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 ZNF358Q9NW07 568 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 NINJ2Q9NZG7 142 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 FAM215AQ9Y5M1 114 aa14.05□□□□□ -0.16
LIMS3-203ENST00000480744 A0A1B0GVC2 190 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 FOXO6A8MYZ6 492 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SUSD5O60279 629 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 FBXO45P0C2W1 286 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 RFPL3SP0C7P2 107 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 GLI4P10075 376 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 MSX1P28360 303 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SERPINB3P29508 390 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 CCNG1P51959 295 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SLC37A1P57057 533 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 TFF3Q07654 80 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 EBPQ15125 230 aaKnown RBP14.04□□□□□ -0.16
LIMS3-203ENST00000480744 HYAL4Q2M3T9 481 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SPRED3Q2MJR0 410 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 TECRLQ5HYJ1 363 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 C1orf185Q5T7R7 199 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 TTC19Q6DKK2 380 aaPredicted RBP14.04□□□□□ -0.16
LIMS3-203ENST00000480744 OR52E8Q6IFG1 317 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 ADGRD1Q6QNK2 874 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 TMEM64Q6YI46 380 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 PLD6Q8N2A8 252 aaKnown RBP14.04□□□□□ -0.16
LIMS3-203ENST00000480744 FBXW8Q8N3Y1 598 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 MMGT1Q8N4V1 131 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 L3MBTL4Q8NA19 623 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 LRRN4CLQ8ND94 238 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 OR52B6Q8NGF0 335 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 WDR20Q8TBZ3 569 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 TREX2Q9BQ50 279 aaPredicted RBP14.04□□□□□ -0.16
LIMS3-203ENST00000480744 ACSS3Q9H6R3 686 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 ZNF703Q9H7S9 590 aaPredicted RBP14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SH2D2AQ9NP31 389 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 ZFP64Q9NPA5 681 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 SPRR3Q9UBC9 169 aa14.04□□□□□ -0.16
LIMS3-203ENST00000480744 AKAP9Q99996 3911 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 C2orf92A0A1B0GVN3 265 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 A0A1W2PS29 197 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 OR6C76A6NM76 312 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 FOXE1O00358 373 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms