RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 NAALAD2Q9Y3Q0 740 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 AP4B1Q9Y6B7 739 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 NUP214P35658 2090 aaPredicted RBP10.37□□□□□ -0.75
VTI1A-204ENST00000480057 CACNA1IQ9P0X4 2223 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 A0A087WV62 115 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 C7orf72A4D263 438 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 MAGEA13PA6NCF6 341 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 GLOD5A6NK44 160 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 C5orf58C9J3I9 102 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 H0YIG0 161 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 HMGN4O00479 90 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 SOCS2O14508 198 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 GNGT2O14610 69 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 PRAMEF10O60809 474 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 PRKRAO75569 313 aaKnown RBP10.37□□□□□ -0.75
VTI1A-204ENST00000480057 NSA2O95478 260 aaKnown RBP10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ATP1B1P05026 303 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 PORP16435 677 aaPredicted RBP10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF23P17027 643 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ITGA2P17301 1181 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 MATN1P21941 496 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ALDH3A2P51648 485 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 XKP51811 444 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 CRYBA2P53672 197 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ITGA1P56199 1179 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 KCNJ10P78508 379 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 BNIP3Q12983 259 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 TP53BP2Q13625 1128 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 DAG1Q14118 895 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF528Q3MIS6 628 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 IFI44LQ53G44 452 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 NHSL2Q5HYW2 709 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 OR2T5Q6IEZ7 315 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 SHQ1Q6PI26 577 aaKnown RBP10.37□□□□□ -0.75
VTI1A-204ENST00000480057 FAM92BQ6ZTR7 304 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 CCDC116Q8IYX3 515 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 FAM181AQ8N9Y4 354 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 TTC29Q8NA56 475 aaPredicted RBP10.37□□□□□ -0.75
VTI1A-204ENST00000480057 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 OR2T29Q8NH02 315 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 OR4C6Q8NH72 309 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 BBS10Q8TAM1 723 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF675Q8TD23 568 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 GATA6Q92908 595 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 TMBIM1Q969X1 311 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 MVB12AQ96EY5 273 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 TGM7Q96PF1 710 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF347Q96SE7 839 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 DPYSL5Q9BPU6 564 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 GABARAPL1Q9H0R8 117 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 BCL2L10Q9HD36 194 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 LIPT1Q9Y234 373 aa10.37□□□□□ -0.75
VTI1A-204ENST00000480057 DUXAA6NLW8 204 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 G3V2T6 193 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 H0YAE9 185 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 M0QX08 132 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 HRO43593 1189 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SOX30O94993 753 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 PGM3O95394 542 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 GPR75O95800 540 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 MT-ND1P03886 318 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 RNH1P13489 461 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 CPMP14384 443 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 ALDH4A1P30038 563 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 FEN1P39748 380 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 AVPR1BP47901 424 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 ARHGDIAP52565 204 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 ARSFP54793 590 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 GFERP55789 205 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 HSD11B2P80365 405 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 BIKQ13323 160 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 GRM7Q14831 915 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 PDK3Q15120 406 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 NR0B2Q15466 257 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 NRF1Q16656 503 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 CLPPQ16740 277 aaPredicted RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 RFX4Q33E94 735 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 YOD1Q5VVQ6 348 aaPredicted RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 FAM180BQ6P0A1 224 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 TNFAIP8L2Q6P589 184 aaPredicted RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 ZCCHC12Q6PEW1 402 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 MED25Q71SY5 747 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 DGLUCYQ7Z3D6 616 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 KRT73Q86Y46 540 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 CHERPQ8IWX8 916 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF595Q8IYB9 648 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 OR2L13Q8N349 312 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 NUP43Q8NFH3 380 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 OR9A2Q8NGT5 310 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SAP25Q8TEE9 199 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SLC38A5Q8WUX1 472 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 GEMIN6Q8WXD5 167 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 NCSTNQ92542 709 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 TFAP2CQ92754 450 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 TAMM41Q96BW9 452 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM19Q96HH6 336 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SLC41A2Q96JW4 573 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 C7orf34Q96L11 122 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 MS4A4EQ96PG1 132 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms