RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 FBXL20Q96IG2 436 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 JSRP1Q96MG2 331 aaPredicted RBP6.16□□□□□ -1.42
FN1-220ENST00000480024 CDK15Q96Q40 435 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 TREX2Q9BQ50 279 aaPredicted RBP6.16□□□□□ -1.42
FN1-220ENST00000480024 TTYH2Q9BSA4 534 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 ZNF717Q9BY31 904 aaPredicted RBP6.16□□□□□ -1.42
FN1-220ENST00000480024 WWTR1Q9GZV5 400 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 VPS11Q9H270 941 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 SLC6A15Q9H2J7 730 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 IPPKQ9H8X2 491 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 KCNJ16Q9NPI9 418 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.16□□□□□ -1.424e-30■■■□□ 17.9
FN1-220ENST00000480024 LYARQ9NX58 379 aaKnown RBP6.16□□□□□ -1.42
FN1-220ENST00000480024 SPRR3Q9UBC9 169 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 ADGRE2Q9UHX3 823 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 ACAD8Q9UKU7 415 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 BOKQ9UMX3 212 aaPredicted RBP6.16□□□□□ -1.42
FN1-220ENST00000480024 PCDHGA11Q9Y5H2 935 aa6.16□□□□□ -1.42
FN1-220ENST00000480024 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.16□□□□□ -1.42
FN1-220ENST00000480024 ABCA4P78363 2273 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ACANP16112 2415 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 A0A0A6YYD5 115 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 TRGV5A0A0B4J1U4 118 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 A0A0G2JNJ9 132 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 IQANK1A0A1B0GTG1 560 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 A0A1B0GVC2 190 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 A0A1W2PR48 441 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 HMX2A2RU54 273 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 FOXO6A8MYZ6 492 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 H0YIV9 168 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 PROM1O43490 865 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SUSD5O60279 629 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 KLHL2O95198 593 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 GPR75O95800 540 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ALDOAP04075 364 aaKnown RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 CLPSP04118 112 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 FBXO45P0C2W1 286 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 RFPL3SP0C7P2 107 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 FAM58BPP0C7Q3 252 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 GLI4P10075 376 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 CAPN3P20807 821 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 TYK2P29597 1187 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SSTR4P31391 388 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 BSGP35613 385 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 TRPC1P48995 793 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ALDH18A1P54886 795 aaKnown RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 GTF2H2Q13888 395 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SLC10A1Q14973 349 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ACAP2Q15057 778 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 PCBP2Q15366 365 aaKnown RBP eCLIP6.15□□□□□ -1.42
FN1-220ENST00000480024 HYAL4Q2M3T9 481 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SPRED3Q2MJR0 410 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 TECRLQ5HYJ1 363 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 C1orf185Q5T7R7 199 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 WLSQ5T9L3 541 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 LIPJQ5W064 366 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SLC22A10Q63ZE4 541 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 RTL6Q6ICC9 239 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 OR52E8Q6IFG1 317 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 GTF2H2CQ6P1K8 395 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ADGRD1Q6QNK2 874 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 CYP20A1Q6UW02 462 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 TMEM64Q6YI46 380 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 WDR53Q7Z5U6 358 aaPredicted RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 CCDC91Q7Z6B0 441 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 FBXW8Q8N3Y1 598 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 PTGR2Q8N8N7 351 aaPredicted RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 WDR20Q8TBZ3 569 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 PAQR8Q8TEZ7 354 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 RIT1Q92963 219 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 UCN3Q969E3 161 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SARAFQ96BY9 339 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 NSUN5Q96P11 429 aaKnown RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 ZNF559Q9BR84 538 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 PELOQ9BRX2 385 aaKnown RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 DOHHQ9BU89 302 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 NOL11Q9H8H0 719 aaKnown RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 WDR41Q9HAD4 459 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 SH2D2AQ9NP31 389 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ZFP64Q9NPA5 681 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 TEX10Q9NXF1 929 aaPredicted RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 ALKBH4Q9NXW9 302 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 NINJ2Q9NZG7 142 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 B4GALT7Q9UBV7 327 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 Q9UFV3 132 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 RNF11Q9Y3C5 154 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 ASB4Q9Y574 426 aa6.15□□□□□ -1.42
FN1-220ENST00000480024 CHCHD2Q9Y6H1 151 aaPredicted RBP6.15□□□□□ -1.42
FN1-220ENST00000480024 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.15□□□□□ -1.42
FN1-220ENST00000480024 FLNAP21333 2647 aaKnown RBP6.15□□□□□ -1.43
FN1-220ENST00000480024 C15orf38-AP3S2A0A0A6YYH1 394 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 C2orf92A0A1B0GVN3 265 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 CCDC189A1A4V9 331 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 OR7A17O14581 309 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 PGRMC2O15173 223 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 KLK8O60259 260 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 UGDHO60701 494 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 HCN1O60741 890 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 WDR1O75083 606 aa6.14□□□□□ -1.43
FN1-220ENST00000480024 ZWINTO95229 277 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms