RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PWWP2BQ6NUJ5 590 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 TMEM107Q6UX40 140 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 SZRD1Q7Z422 152 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 PROSER1Q86XN7 944 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 TMEM126BQ8IUX1 230 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 MICU2Q8IYU8 434 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 SLC38A9Q8NBW4 561 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 AGBL5Q8NDL9 886 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 PYDC1Q8WXC3 89 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 FIG4Q92562 907 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 KAT2AQ92830 837 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 PPWD1Q96BP3 646 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 TBC1D20Q96BZ9 403 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ELP4Q96EB1 424 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CDC6Q99741 560 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CTRCQ99895 268 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 DPH2Q9BQC3 489 aaPredicted RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 IRF2BPLQ9H1B7 796 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ANKRA2Q9H9E1 313 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 PRTFDC1Q9NRG1 225 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 SEMA3GQ9NS98 782 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 NKX1-2Q9UD57 310 aaPredicted RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 RAPGEFL1Q9UHV5 662 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CORO2BQ9UQ03 480 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 A0A1B0GX78 115 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CLDN4O14493 209 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CTNSO60931 367 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 SCRG1O75711 98 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CCL4P13236 92 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 GGT1P19440 569 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CLDN6P56747 220 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 RPS26P62854 115 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 MRPS22P82650 360 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 SLC13A2Q13183 592 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 TP53BP2Q13625 1128 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ADRM1Q16186 407 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CPZQ66K79 652 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 LCN8Q6JVE9 175 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 RBM44Q6ZP01 1051 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 PPP1R3BQ86XI6 285 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 PTOV1Q86YD1 416 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ZNF595Q8IYB9 648 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ZZZ3Q8IYH5 903 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 TNIP2Q8NFZ5 429 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 JADE3Q92613 823 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 MAL2Q969L2 176 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 NEURL3Q96EH8 262 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 REXO5Q96IC2 774 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 CHST8Q9H2A9 424 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 DCLRE1BQ9H816 532 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 S100A14Q9HCY8 104 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ZCCHC3Q9NUD5 404 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 TRPC4Q9UBN4 977 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 MRPS33Q9Y291 106 aaKnown RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.72
APTX-223ENST00000479656 TGFBR3LH3BV60 316 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 CXCR6O00574 342 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 FKBP6O75344 327 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 GMNNO75496 209 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 RFPL3O75679 317 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 FHP07954 510 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 NT5EP21589 574 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 FBLP22087 321 aaKnown RBP10.52□□□□□ -0.73
APTX-223ENST00000479656 MC3RP41968 323 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 MRPS35P82673 323 aaKnown RBP10.52□□□□□ -0.73
APTX-223ENST00000479656 E2F1Q01094 437 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 INSM1Q01101 510 aaPredicted RBP10.52□□□□□ -0.73
APTX-223ENST00000479656 RHDQ02161 417 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 STX4Q12846 297 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 VMACQ2NL98 169 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 STPG1Q5TH74 334 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 RHBDD2Q6NTF9 364 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 FAM111BQ6SJ93 734 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 NETO1Q8TDF5 533 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 ADAMTS18Q8TE60 1221 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 CLIP3Q96DZ5 547 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 MAGEL2Q9UJ55 1249 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 FAF1Q9UNN5 650 aaPredicted RBP10.52□□□□□ -0.73
APTX-223ENST00000479656 SRPK3Q9UPE1 567 aa10.52□□□□□ -0.73
APTX-223ENST00000479656 TCRBV3S1A0A5B6 114 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 POLR1CO15160 346 aaPredicted RBP10.51□□□□□ -0.73
APTX-223ENST00000479656 EMC8O43402 210 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 NME6O75414 186 aaPredicted RBP10.51□□□□□ -0.73
APTX-223ENST00000479656 TNFRSF21O75509 655 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 ATP1B1P05026 303 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 FGF5P12034 268 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 MAOAP21397 527 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 MATN1P21941 496 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 SOX18P35713 384 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 PRIM2P49643 509 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 MC2RQ01718 297 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 DSG2Q14126 1118 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 IL11RAQ14626 422 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 RCN1Q15293 331 aa10.51□□□□□ -0.73
APTX-223ENST00000479656 TRMT12Q53H54 448 aaKnown RBP10.51□□□□□ -0.73
APTX-223ENST00000479656 VWA2Q5GFL6 755 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms