RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ETFDHQ16134 617 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 SNAPC1Q16533 368 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 GPR33Q49SQ1 333 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 NHLRC3Q5JS37 347 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 SPANXN4Q5MJ08 99 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM92BQ6ZTR7 304 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 HTR3DQ70Z44 454 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 SPNS2Q8IVW8 549 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 OR11H4Q8NGC9 324 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 OR8D4Q8NGM9 314 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 METTL6Q8TCB7 284 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 PGAP3Q96FM1 320 aaPredicted RBP12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 FUBP3Q96I24 572 aaKnown RBP eCLIP12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 AARSD1Q9BTE6 412 aaKnown RBP12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 FOXQ1Q9C009 403 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 GHITMQ9H3K2 345 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 ATXN3LQ9H3M9 355 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 BRD9Q9H8M2 597 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 ATP13A1Q9HD20 1204 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 OBP2AQ9NY56 170 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 COA4Q9NYJ1 87 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 KCMF1Q9P0J7 381 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 SCP2D1Q9UJQ7 156 aa12.52□□□□□ -0.4
CNKSR3-204ENST00000479339 LOC102723532A0A0G2JNH3 316 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 ISM1B1AKI9 464 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 RGS14O43566 566 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 AP2A2O94973 939 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 HMGA1P17096 107 aaKnown RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 HOXB9P17482 250 aaPredicted RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 ZNF730Q6ZMV8 503 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 Q6ZPB1 254 aaPredicted RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 RASSF6Q6ZTQ3 369 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 CHMP1BQ7LBR1 199 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 LIX1Q8N485 282 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 NKAPQ8N5F7 415 aaKnown RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 UXS1Q8NBZ7 420 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 OR11H7Q8NGC8 314 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 IRF7Q92985 503 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 RSPRY1Q96DX4 576 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 KCTD7Q96MP8 289 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 MAPKAP1Q9BPZ7 522 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 CD274Q9NZQ7 290 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 CRYL1Q9Y2S2 319 aa12.52□□□□□ -0.41
CNKSR3-204ENST00000479339 E2F3O00716 465 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 SIGLEC6O43699 453 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 MMP20O60882 483 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 DIRAS1O95057 198 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 DNASE1P24855 282 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 GDI1P31150 447 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 SSTR4P31391 388 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 KDELR2P33947 212 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 NBL1P41271 181 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 HSPA7P48741 367 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 MEOX2P50222 304 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 HK3P52790 923 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 WNT3AP56704 352 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 RPL38P63173 70 aaKnown RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 GRM7Q14831 915 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 GTDC1Q4AE62 458 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 RFTN2Q52LD8 501 aaPredicted RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 CNIH2Q6PI25 160 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 KRT74Q7RTS7 529 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 HSD17B13Q7Z5P4 300 aaPredicted RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 FAM9CQ8IZT9 166 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 EIF4E3Q8N5X7 224 aaKnown RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 NELL2Q99435 816 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 SLCO1C1Q9NYB5 712 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 GALPQ9UBC7 116 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 NDRG3Q9UGV2 375 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 PADI2Q9Y2J8 665 aa12.51□□□□□ -0.41
CNKSR3-204ENST00000479339 MEIKINA0A087WXM9 373 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 MYBPHLA2RUH7 354 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SHISA7A6NL88 538 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 LINC01387J3KSC0 135 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SLC28A1O00337 649 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 HCRTO43612 131 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CSO75390 466 aaKnown RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 F11P03951 625 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 FGF2P09038 288 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SRCP12931 536 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 710.4 ms